PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | KZV31556.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Gesneriaceae; Didymocarpoideae; Trichosporeae; Loxocarpinae; Dorcoceras
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Family | FAR1 | ||||||||
Protein Properties | Length: 133aa MW: 15127.1 Da PI: 4.7755 | ||||||||
Description | FAR1 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | FAR1 | 33.1 | 1.9e-10 | 71 | 116 | 2 | 47 |
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk 47 Y++YA+ GFsvrk +++ ++++ei +++f+Cs+eg+++e++++ KZV31556.1 71 LYCQYAHAKGFSVRKGEQRCFSHSKEIQSKEFNCSCEGSKDEKRSS 116 59**************************************998876 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Pfam | PF03101 | 4.0E-8 | 71 | 116 | IPR004330 | FAR1 DNA binding domain |
Sequence ? help Back to Top |
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Protein Sequence Length: 133 aa Download sequence Send to blast |
MEVENSLSLE ELEENHIEEV VCREFPTTQC GLPNLSRSEI EVPTENSIVD VLKSKLEVGS 60 IVNNLEEAYL LYCQYAHAKG FSVRKGEQRC FSHSKEIQSK EFNCSCEGSK DEKRSSKKIS 120 VYHGLLELIV KLD |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | KZV31556.1 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_012836749.1 | 2e-17 | PREDICTED: protein FAR1-RELATED SEQUENCE 5-like | ||||
Refseq | XP_012856914.1 | 1e-17 | PREDICTED: protein FAR1-RELATED SEQUENCE 5-like | ||||
TrEMBL | A0A2Z7BHY5 | 4e-90 | A0A2Z7BHY5_9LAMI; Uncharacterized protein |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA16786 | 2 | 3 |