PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID KZV30913.1
Organism
Dorcoceras hygrometricum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Gesneriaceae; Didymocarpoideae; Trichosporeae; Loxocarpinae; Dorcoceras
Family BBR-BPC
Protein Properties Length: 427aa    MW: 47171 Da    PI: 8.3877
Description BBR-BPC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
KZV30913.1genomeCNUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GAGA_bind292.41.9e-89127829293
   GAGA_bind  29 mssiaerdakirernlalsekkaavaerdmaflqrdkalaernkalverdnkllalllvensla....salpvgvqvlsgtksidslqq.lsepqleds 122
                 m++ aerda+irern+al e+k a++erdma lqrd+a+aern+a+ erd++++al+++ens+       + +g +  sg k+i   q+ +se  +++ 
  KZV30913.1   1 MAITAERDAAIRERNMALEERKRAFQERDMAMLQRDAAIAERNAAIQERDEAIAALQFRENSVRaydaLPDTSGNELPSGDKHIPYQQMhVSEAPFSPR 99 
                 78899********************************************************98877443444566777888899888883344555555 PP

   GAGA_bind 123 avelreeeklealpieeaaeeakekkkkkkrqrakkpkekkak.kkkkksekskkkvkkesader...........skaekksidlvlngvslDestlP 209
                      +e+++ + p+  +   +++ +++k ++ ak++k+ +   +  +  +k+ ++v++++ +++           +  ++ + +l+ln++s+D+s++P
  KZV30913.1 100 ESSRVDEHTVMEAPLIAK---SRKGRQPKDGKPAKSAKSARIGkRSSDGLSKPVNSVASNGWNKErvlesdeedldKPVSW-KDNLGLNQISFDDSAMP 194
                 555444444444443332...333344444555555555544413333445555666666655334777777788444555.569************** PP

   GAGA_bind 210 vPvCsCtGalrqCYkWGnGGWqSaCCtttiSvyPLPvstkrrgaRiagrKmSqgafkklLekLaaeGydlsnpvDLkdhWAkHG 293
                 vPvC+CtG+++ CY+WG+GGWqSaCCtttiS+yPLP+ ++rr +R++grKmS++af+klL++LaaeGyd+s+p+DLk+hWAkH 
  KZV30913.1 195 VPVCTCTGSPQPCYRWGSGGWQSACCTTTISMYPLPQAANRRYSRVGGRKMSGSAFSKLLNRLAAEGYDFSTPLDLKSHWAKHA 278
                 ***********************************************************************************6 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF062174.4E-781278IPR010409GAGA-binding transcriptional activator
SMARTSM012261.2E-921277IPR010409GAGA-binding transcriptional activator
Sequence ? help Back to Top
Protein Sequence    Length: 427 aa     Download sequence    Send to blast
MAITAERDAA IRERNMALEE RKRAFQERDM AMLQRDAAIA ERNAAIQERD EAIAALQFRE  60
NSVRAYDALP DTSGNELPSG DKHIPYQQMH VSEAPFSPRE SSRVDEHTVM EAPLIAKSRK  120
GRQPKDGKPA KSAKSARIGK RSSDGLSKPV NSVASNGWNK ERVLESDEED LDKPVSWKDN  180
LGLNQISFDD SAMPVPVCTC TGSPQPCYRW GSGGWQSACC TTTISMYPLP QAANRRYSRV  240
GGRKMSGSAF SKLLNRLAAE GYDFSTPLDL KSHWAKHANE LPPRQTVRSG GLEIFRLGVL  300
EVGRPATLPS GDELDVLPAM TCNHRHGSKG VGSHPDEGPP MLKTLVGQEG QVAYQVACVG  360
SLSRADLTSG RETILVQTRY TSRSRGALWS RGLPGRAEPY LQEVFLEELN SSCKRSSTED  420
HQWRFLF
Cis-element ? help Back to Top
SourceLink
PlantRegMapKZV30913.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011099810.11e-152protein BASIC PENTACYSTEINE6
RefseqXP_011099811.11e-152protein BASIC PENTACYSTEINE6
TrEMBLA0A2Z7B8S90.0A0A2Z7B8S9_9LAMI; GAGA-binding transcriptional activator
STRINGMigut.H01143.1.p1e-117(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA80622230
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G42520.22e-74basic pentacysteine 6