PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID KZV30112.1
Organism
Dorcoceras hygrometricum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Gesneriaceae; Didymocarpoideae; Trichosporeae; Loxocarpinae; Dorcoceras
Family GeBP
Protein Properties Length: 311aa    MW: 35374 Da    PI: 6.5829
Description GeBP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
KZV30112.1genomeCNUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF57373.73.3e-2330123397
      DUF573   3 fqrlwseeDeivlLqGlidfkaktgkspsddidafyefvkksisfkvsksqlveKirrLKkKfkkkvkkaksgkepsfskehdqkifelskkiWg 97 
                  +r+w+e Dei +LqGl+ + + +      d+  fy+ +++ +   +++sql+eK+rrL+kKf+  +++ ++g ++s  ++hd++ +elsk++W+
  KZV30112.1  30 YHRIWTEPDEIRFLQGLLHCSSLN-LAFPRDLGIFYSHFSNTMPQPYTNSQLSEKLRRLRKKFHLISARLSTGLDQSQLSPHDRSLYELSKQLWH 123
                 68******************6655.56778****************************************************************7 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF045041.1E-2531123IPR007592Protein of unknown function DUF573
Sequence ? help Back to Top
Protein Sequence    Length: 311 aa     Download sequence    Send to blast
MDSTTIQSSA SKLPIKRKTP LDPNPTPFKY HRIWTEPDEI RFLQGLLHCS SLNLAFPRDL  60
GIFYSHFSNT MPQPYTNSQL SEKLRRLRKK FHLISARLST GLDQSQLSPH DRSLYELSKQ  120
LWHPDFASIS PFNGSRDVAL DNCSGMVKKS NLHGVKVDFS PHLPVILPSK FDVTLGLKCF  180
GDENVDEDKC GDDFLGSDNG EEAKLSEVNV DFEGEDVDMD NSGIHCRNLG LGPPNFNRED  240
TLGELVVKVV LDVFDECFND LRMIFLAGGS GQVRNMSYQS LQHRWQKQRI AELDVWGRRL  300
RLVLEHSLQK Q
Cis-element ? help Back to Top
SourceLink
PlantRegMapKZV30112.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011097448.11e-103uncharacterized protein LOC105176365
TrEMBLA0A2Z7BDU80.0A0A2Z7BDU8_9LAMI; Uncharacterized protein
STRINGMigut.K00897.1.p8e-94(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA128221921
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G28040.11e-16DNA-binding storekeeper protein-related transcriptional regulator