PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID KZV29457.1
Organism
Dorcoceras hygrometricum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Gesneriaceae; Didymocarpoideae; Trichosporeae; Loxocarpinae; Dorcoceras
Family Trihelix
Protein Properties Length: 292aa    MW: 33420.2 Da    PI: 4.6466
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
KZV29457.1genomeCNUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix32.62.1e-101887271
    trihelix  2 WtkqevlaLiearremeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkr 71
                W+ +e l L++    +e++ +++    ++W+++ +++ +  ++r+ +qC+ +w+++  +yk++k+  ++ 
  KZV29457.1 18 WSAEESLILVNEIHAIESEWGTTLPSYQKWKQIVDNCNSLDVNRNLNQCRRRWNEIFSEYKRVKNAPGGY 87
                ****************************************************************987764 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF138376.4E-1017100No hitNo description
Gene3DG3DSA:1.10.10.603.7E-51774IPR009057Homeodomain-like
PROSITE profilePS500907.4911874IPR017877Myb-like domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0009506Cellular Componentplasmodesma
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 292 aa     Download sequence    Send to blast
MAEPRMSHRT RSKAAPDWSA EESLILVNEI HAIESEWGTT LPSYQKWKQI VDNCNSLDVN  60
RNLNQCRRRW NEIFSEYKRV KNAPGGYGSL QADLFDAIDR CVSAKGKRGG DDEVEDEPAE  120
EIEAAKLEDE EEDQAVMDTD PDSDPEAQGR VTKFFFEAGS KKQKRRMKRQ KRRIEKLNPW  180
GYFTSPKIKL EDSSNTNGKL ENTNCMSLLE ESTVETKEQN MCRILQENAL QINALLECDT  240
AADVDYNLAD LKNAEAVEKT DSTRQRGDKL IIYLENISRT LKDLSDLVEQ CK
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1160168KKQKRRMKR
2163170KRRMKRQK
Cis-element ? help Back to Top
SourceLink
PlantRegMapKZV29457.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_022874386.11e-105trihelix transcription factor ASR3
TrEMBLA0A2Z7B7880.0A0A2Z7B788_9LAMI; Uncharacterized protein
STRINGMigut.E01408.1.p1e-93(Erythranthe guttata)
STRINGMigut.E01420.1.p1e-93(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA83602124
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G31270.12e-27sequence-specific DNA binding transcription factors