PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID KZV28523.1
Common NameHsf1
Organism
Dorcoceras hygrometricum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Gesneriaceae; Didymocarpoideae; Trichosporeae; Loxocarpinae; Dorcoceras
Family HSF
Protein Properties Length: 383aa    MW: 44016.6 Da    PI: 5.3666
Description HSF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
KZV28523.1genomeCNUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HSF_DNA-bind111.75.1e-35751672103
                   HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXXXXXX CS
  HSF_DNA-bind   2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkellekik 98 
                   Flkk++e+++d+++++++sws  gnsfvv+d+++fa+++Lpk+Fkh+nf+SFvRQLn+Y F+k+++++         weF+++ F+++kk+ll++ik
    KZV28523.1  75 FLKKTFEMVDDPRTDSILSWSGAGNSFVVWDPHTFATDLLPKHFKHNNFSSFVRQLNTYRFRKIDSDR---------WEFANEGFRRNKKHLLKHIK 162
                   9****************************************************************999.........******************** PP

                   XXXXX CS
  HSF_DNA-bind  99 rkkse 103
                   r+k++
    KZV28523.1 163 RRKQS 167
                   **986 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.10.10.104.9E-3871164IPR011991Winged helix-turn-helix DNA-binding domain
SMARTSM004153.6E-5671164IPR000232Heat shock factor (HSF)-type, DNA-binding
SuperFamilySSF467857.21E-3571164IPR011991Winged helix-turn-helix DNA-binding domain
PRINTSPR000568.1E-187598IPR000232Heat shock factor (HSF)-type, DNA-binding
PfamPF004476.2E-3175164IPR000232Heat shock factor (HSF)-type, DNA-binding
PRINTSPR000568.1E-18113125IPR000232Heat shock factor (HSF)-type, DNA-binding
PROSITE patternPS004340114138IPR000232Heat shock factor (HSF)-type, DNA-binding
PRINTSPR000568.1E-18126138IPR000232Heat shock factor (HSF)-type, DNA-binding
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 383 aa     Download sequence    Send to blast
MVSVVAAGSK QEMVASEALI GVKEEPLVFL DEAEYLGGGF SGCRSGGEEE EWGDAAEEHL  60
PKPLEGLRDI GPPPFLKKTF EMVDDPRTDS ILSWSGAGNS FVVWDPHTFA TDLLPKHFKH  120
NNFSSFVRQL NTYRFRKIDS DRWEFANEGF RRNKKHLLKH IKRRKQSPQM MRPHEAAAAA  180
QPWQYPTNHG VDSEIYKLGA DQSLLRQEIV KLRQQQECSQ RYIAAMEERL HASEMQQKHM  240
IVFMIKSLKD PMFLLDCVDR INRKRALSSE EVAFKRRRLS ENMESNIGID QDRRFQAQEE  300
LSTIPSEIQT LFSPDSSGSP VQDHKAETEL HSSDVCSDNF ILWEKLMEDD MIYDEEQGPE  360
KQPSDTRRIG EFDPKTVAMG FAY
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2ldu_A3e-237316718123Heat shock factor protein 1
5d5u_B4e-237316427129Heat shock factor protein 1
5d5v_B4e-237316427129Heat shock factor protein 1
5d5v_D4e-237316427129Heat shock factor protein 1
Search in ModeBase
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1157163LKHIKRR
2262277RKRALSSEEVAFKRRR
3274278KRRRL
Cis-element ? help Back to Top
SourceLink
PlantRegMapKZV28523.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009606363.11e-121PREDICTED: heat stress transcription factor A-7a-like
TrEMBLC4PGC50.0C4PGC5_9LAMI; Heat shock factor
STRINGXP_009606363.11e-120(Nicotiana tomentosiformis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA56812235
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G26150.12e-65heat shock transcription factor A2
Publications ? help Back to Top
  1. Zhu Y, et al.
    Ectopic over-expression of BhHsf1, a heat shock factor from the resurrection plant Boea hygrometrica, leads to increased thermotolerance and retarded growth in transgenic Arabidopsis and tobacco.
    Plant Mol. Biol., 2009. 71(4-5): p. 451-67
    [PMID:19701723]