PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID KZV28445.1
Organism
Dorcoceras hygrometricum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Gesneriaceae; Didymocarpoideae; Trichosporeae; Loxocarpinae; Dorcoceras
Family ERF
Protein Properties Length: 183aa    MW: 19786.2 Da    PI: 4.5668
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
KZV28445.1genomeCNUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP258.81.3e-183180355
         AP2  3 ykGVrwdkkrgrWvAeIrdpsengkr..krfslgkfgtaeeAakaaiaarkkleg 55
                y+GVr++k++g+Wv+eIr+p     r   r++lg+f tae+Aa a++ a+++l+g
  KZV28445.1 31 YRGVRRRKTSGKWVSEIREP-----RtpNRIWLGTFATAEMAAVAYDVAALALKG 80
                9******************9.....4478***********************998 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:3.30.730.101.3E-283090IPR001471AP2/ERF domain
PROSITE profilePS5103222.1683088IPR001471AP2/ERF domain
SuperFamilySSF541719.15E-203089IPR016177DNA-binding domain
SMARTSM003806.9E-303094IPR001471AP2/ERF domain
PfamPF008471.5E-113180IPR001471AP2/ERF domain
PRINTSPR003671.4E-53142IPR001471AP2/ERF domain
CDDcd000181.65E-273190No hitNo description
PRINTSPR003671.4E-55470IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 183 aa     Download sequence    Send to blast
MYSQSSEEAG GSSISPTSEG VANAFPGRKA YRGVRRRKTS GKWVSEIREP RTPNRIWLGT  60
FATAEMAAVA YDVAALALKG KETELNFPSS APFLPVPAST SPRDIQAAAA SAAAASAAAL  120
DAVNSRENSF QPPPAVDEFF DEDLIFDMPN VLLDMAQGML MSPPRLWFGA EENKQIDNLW  180
NYP
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5wx9_A3e-1231891573Ethylene-responsive transcription factor ERF096
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtProbably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). {ECO:0000250}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapKZV28445.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_022846449.17e-63ethylene-responsive transcription factor ERF024
SwissprotQ9SJR04e-47ERF24_ARATH; Ethylene-responsive transcription factor ERF024
TrEMBLA0A2Z7B3U31e-129A0A2Z7B3U3_9LAMI; Integrase-type DNA-binding superfamily protein
STRINGXP_009793202.15e-59(Nicotiana sylvestris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA55322110
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G36450.14e-36ERF family protein