PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID KZV28334.1
Organism
Dorcoceras hygrometricum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Gesneriaceae; Didymocarpoideae; Trichosporeae; Loxocarpinae; Dorcoceras
Family ERF
Protein Properties Length: 200aa    MW: 21970.9 Da    PI: 4.8891
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
KZV28334.1genomeCNUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP256.28.8e-182271255
         AP2  2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                +y+GVr++k +g++v+eIr p++   r r++lg+++tae+Aa+a +aa  +l+g
  KZV28334.1 22 KYTGVRRRK-WGKYVCEIRLPNS---RERIWLGSYDTAEKAARAFDAAQFCLRG 71
                8*****998.**********933...5*************************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000185.63E-262281No hitNo description
PROSITE profilePS5103221.2192279IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.102.4E-292280IPR001471AP2/ERF domain
PfamPF008472.5E-112271IPR001471AP2/ERF domain
SMARTSM003808.5E-292285IPR001471AP2/ERF domain
SuperFamilySSF541712.16E-202280IPR016177DNA-binding domain
PRINTSPR003675.5E-92334IPR001471AP2/ERF domain
PRINTSPR003675.5E-94561IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 200 aa     Download sequence    Send to blast
MDISGRNSSS LSNLDVQDQE LKYTGVRRRK WGKYVCEIRL PNSRERIWLG SYDTAEKAAR  60
AFDAAQFCLR GRNAKFNFPD DPPNIAGGQS LTPGEIQAVA QRYASSFGGS SSSQRRHASP  120
PVESGGEDPF RAGAANSIDW SFLDTCGGRD QHESVSDFGL FQEPGDVYAP PHFAADVVDD  180
DEDNGHGHGG YLTSNFLWNF
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5wx9_A2e-1622811474Ethylene-responsive transcription factor ERF096
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapKZV28334.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_022856083.14e-71ethylene-responsive transcription factor ERF017-like
TrEMBLA0A2Z7B9861e-146A0A2Z7B986_9LAMI; Uncharacterized protein
STRINGMigut.A00330.1.p7e-56(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA19392466
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G21960.12e-43ERF family protein