PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | KZV28177.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Gesneriaceae; Didymocarpoideae; Trichosporeae; Loxocarpinae; Dorcoceras
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Family | ERF | ||||||||
Protein Properties | Length: 142aa MW: 15714.8 Da PI: 10.0675 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 63.5 | 4.6e-20 | 8 | 57 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaarkkleg 55 +y+GVr ++ +gr++AeIrd ++ ++r++lg+f+t+eeAa a++ a+++++g KZV28177.1 8 HYRGVRKRP-WGRYAAEIRDpWK----KTRVWLGTFDTPEEAALAYDGAARSFRG 57 7********.**********883....5************************998 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
CDD | cd00018 | 3.49E-29 | 7 | 67 | No hit | No description |
Pfam | PF00847 | 4.1E-13 | 8 | 57 | IPR001471 | AP2/ERF domain |
PROSITE profile | PS51032 | 23.011 | 8 | 65 | IPR001471 | AP2/ERF domain |
Gene3D | G3DSA:3.30.730.10 | 6.9E-32 | 8 | 66 | IPR001471 | AP2/ERF domain |
SuperFamily | SSF54171 | 1.83E-22 | 8 | 66 | IPR016177 | DNA-binding domain |
SMART | SM00380 | 3.4E-36 | 8 | 71 | IPR001471 | AP2/ERF domain |
PRINTS | PR00367 | 3.8E-11 | 9 | 20 | IPR001471 | AP2/ERF domain |
PRINTS | PR00367 | 3.8E-11 | 31 | 47 | IPR001471 | AP2/ERF domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 142 aa Download sequence Send to blast |
MASTPEAHYR GVRKRPWGRY AAEIRDPWKK TRVWLGTFDT PEEAALAYDG AARSFRGPKA 60 KTNFPAADAS GLSLDLKLTS PENRWVYPSE RVMINDVILS SPRNGRGAAA PPEKGEYGSP 120 AYLGVVRRGL AIDLNEPPSL WM |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
2gcc_A | 2e-21 | 8 | 71 | 5 | 69 | ATERF1 |
3gcc_A | 2e-21 | 8 | 71 | 5 | 69 | ATERF1 |
Search in ModeBase |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways. Transcription factor that binds to the GCC-box pathogenesis-related promoter element. Acts as a transcriptional inhibitor and may regulate other AtERFs (By similarity). {ECO:0000250, ECO:0000269|PubMed:11487705}. |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | KZV28177.1 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_012849383.1 | 6e-60 | PREDICTED: ethylene-responsive transcription factor 12 | ||||
Swissprot | Q94ID6 | 1e-39 | ERF81_ARATH; Ethylene-responsive transcription factor 12 | ||||
TrEMBL | A0A2Z7B8I8 | 7e-98 | A0A2Z7B8I8_9LAMI; Ethylene-responsive transcription factor 12 | ||||
STRING | Migut.M01117.1.p | 2e-59 | (Erythranthe guttata) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA21 | 24 | 1165 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G28360.1 | 5e-42 | ERF domain protein 12 |