PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID KZV28177.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Gesneriaceae; Didymocarpoideae; Trichosporeae; Loxocarpinae; Dorcoceras
Family ERF
Protein Properties Length: 142aa    MW: 15714.8 Da    PI: 10.0675
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
KZV28177.1genomeCNUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP263.54.6e-20857255
         AP2  2 gykGVrwdkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                +y+GVr ++ +gr++AeIrd ++    ++r++lg+f+t+eeAa a++ a+++++g
  KZV28177.1  8 HYRGVRKRP-WGRYAAEIRDpWK----KTRVWLGTFDTPEEAALAYDGAARSFRG 57
                7********.**********883....5************************998 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000183.49E-29767No hitNo description
PfamPF008474.1E-13857IPR001471AP2/ERF domain
PROSITE profilePS5103223.011865IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.106.9E-32866IPR001471AP2/ERF domain
SuperFamilySSF541711.83E-22866IPR016177DNA-binding domain
SMARTSM003803.4E-36871IPR001471AP2/ERF domain
PRINTSPR003673.8E-11920IPR001471AP2/ERF domain
PRINTSPR003673.8E-113147IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 142 aa     Download sequence    Send to blast
MASTPEAHYR GVRKRPWGRY AAEIRDPWKK TRVWLGTFDT PEEAALAYDG AARSFRGPKA  60
KTNFPAADAS GLSLDLKLTS PENRWVYPSE RVMINDVILS SPRNGRGAAA PPEKGEYGSP  120
AYLGVVRRGL AIDLNEPPSL WM
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2gcc_A2e-21871569ATERF1
3gcc_A2e-21871569ATERF1
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtInvolved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways. Transcription factor that binds to the GCC-box pathogenesis-related promoter element. Acts as a transcriptional inhibitor and may regulate other AtERFs (By similarity). {ECO:0000250, ECO:0000269|PubMed:11487705}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapKZV28177.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012849383.16e-60PREDICTED: ethylene-responsive transcription factor 12
SwissprotQ94ID61e-39ERF81_ARATH; Ethylene-responsive transcription factor 12
TrEMBLA0A2Z7B8I87e-98A0A2Z7B8I8_9LAMI; Ethylene-responsive transcription factor 12
STRINGMigut.M01117.1.p2e-59(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA21241165
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G28360.15e-42ERF domain protein 12