PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | KZV27640.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Gesneriaceae; Didymocarpoideae; Trichosporeae; Loxocarpinae; Dorcoceras
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Family | NAC | ||||||||
Protein Properties | Length: 202aa MW: 23257.7 Da PI: 10.2021 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 55.4 | 2.1e-17 | 32 | 117 | 52 | 128 |
NAM 52 kaeekewyfFskrdkkyatgkrknra........tksgyWkatgkdkevlskkgelvglkktLvfy..kgrapkgektdWvmheyrl 128 k++ ++++fF + ++ya+g+rk+r ++ +W++tgk+k+v+ + l+g kk++v+y +++ +k+ k++W+mh+y+l KZV27640.1 32 KKDGSSVHFFYRIINAYASGQRKRRRisgrestiKAHVRWHKTGKTKSVMG-NVLLKGFKKIMVLYapSKKGSKPDKCNWIMHQYHL 117 4456688******************75777776555889***********9.9999**********7756777888*********98 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS51005 | 17.868 | 1 | 136 | IPR003441 | NAC domain |
SuperFamily | SSF101941 | 1.07E-19 | 32 | 136 | IPR003441 | NAC domain |
Pfam | PF02365 | 1.5E-6 | 38 | 117 | IPR003441 | NAC domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 202 aa Download sequence Send to blast |
MLLHWVSKEF HWILLLLSQR NKFIQYNCSG AKKDGSSVHF FYRIINAYAS GQRKRRRISG 60 RESTIKAHVR WHKTGKTKSV MGNVLLKGFK KIMVLYAPSK KGSKPDKCNW IMHQYHLGAN 120 EDEQEGEYVV SKIFYQPQKG TEYNETFIVK EESDLGLTQA IPKTPKMSTP DPPRSQYTPS 180 FNGGSDDYLI KSFVQVGETF TP |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 52 | 56 | RKRRR |
2 | 53 | 57 | KRRRI |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | KZV27640.1 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_011097382.1 | 5e-76 | SUPPRESSOR OF GAMMA RESPONSE 1 | ||||
TrEMBL | A0A2Z7B7G4 | 1e-150 | A0A2Z7B7G4_9LAMI; NAC domain-containing protein 8-like | ||||
STRING | cassava4.1_027882m | 3e-61 | (Manihot esculenta) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA8175 | 22 | 29 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G14490.1 | 4e-38 | NAC domain containing protein 85 |