PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID KZV27521.1
Organism
Dorcoceras hygrometricum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Gesneriaceae; Didymocarpoideae; Trichosporeae; Loxocarpinae; Dorcoceras
Family bHLH
Protein Properties Length: 348aa    MW: 38875 Da    PI: 8.3676
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
KZV27521.1genomeCNUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH39.11.4e-12277322655
                 HHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
         HLH   6 nerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                 +++Er RR ri +++ +L++l+P+     +k  + a++L +Ave+Ik+Lq
  KZV27521.1 277 SIAERMRRTRISEKMKKLQDLIPNM----DKQTNTADMLDLAVEHIKELQ 322
                 689*********************7....688*****************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088814.634271321IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474591.57E-15273331IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000832.53E-12275326No hitNo description
Gene3DG3DSA:4.10.280.102.9E-15276333IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003538.1E-14277327IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000109.9E-10277322IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 348 aa     Download sequence    Send to blast
MGTYDDMFGN QNQNQPQQIQ QSCGLARYRS APGSFLLESS TEISANGDES EAFFHALMET  60
GLLDLNQKDS EEMQYFTKQE ARNGKSEFCG GKIAGSYSVG MEININASNI GRQSSSPAEF  120
YSGYGVVEEV GNYRVHNGKD SNSSPSRFRN HIRFSSPTSS TSRFMPENGS RTRSSENCGF  180
RNNKDFEPPS TQDPWNDHPP IKGNQDGEQK PSSNWNGLGN TNEETRKRSP VLVHHLSLPK  240
SSAEAQMANV QKFLHFQQDT VPCQTRAKRG FATHPRSIAE RMRRTRISEK MKKLQDLIPN  300
MDKQTNTADM LDLAVEHIKE LQKQVSTLTE ARSKCVCSSK PKPATSTA
Cis-element ? help Back to Top
SourceLink
PlantRegMapKZV27521.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011087339.11e-119transcription factor bHLH130
TrEMBLA0A2Z7B0V00.0A0A2Z7B0V0_9LAMI; Uncharacterized protein
STRINGMigut.B01333.1.p1e-94(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA44352238
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G42280.12e-48bHLH family protein