PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID KZV27238.1
Organism
Dorcoceras hygrometricum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Gesneriaceae; Didymocarpoideae; Trichosporeae; Loxocarpinae; Dorcoceras
Family C2H2
Protein Properties Length: 426aa    MW: 46677.6 Da    PI: 9.6029
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
KZV27238.1genomeCNUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H214.97.9e-05191214123
                 EEETTTTEEESSHHHHHHHHHH.T CS
     zf-C2H2   1 ykCpdCgksFsrksnLkrHirt.H 23 
                 y+C+ Cg++F  ++ L++H  + H
  KZV27238.1 191 YTCHRCGEHFVKWEVLESHHLSkH 214
                 9******************99877 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS501578.954191215IPR007087Zinc finger, C2H2
PROSITE patternPS000280193214IPR007087Zinc finger, C2H2
SuperFamilySSF563993.84E-21215425No hitNo description
Gene3DG3DSA:3.90.228.101.6E-8215408IPR012317Poly(ADP-ribose) polymerase, catalytic domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003950Molecular FunctionNAD+ ADP-ribosyltransferase activity
GO:0046872Molecular Functionmetal ion binding
Sequence ? help Back to Top
Protein Sequence    Length: 426 aa     Download sequence    Send to blast
MGEKKKELPK VWFSLKKSFD CKSDTSDVYT PKNKKNLSSI LTKKTRNRSG CSRSISNLKD  60
VIHGSKRHFE KPPSCSPRSI GSSEFGNPIT HEVILSNSKC ELKITGYGGF SAGGGGGGGG  120
GGDGGSTYLG TLTPGTPGPR VQPSMLYFKA PNMDSDATPP RKKVGVLTER DGFASKRRGS  180
IDEGSNGICG YTCHRCGEHF VKWEVLESHH LSKHALTELP EGDSSRKIVE IICRSSWLKA  240
DNQHVRIDKI LKVHNMQRTL SRFEEHREMV KLKATKLAKK HPRCIADGNE LLRFYGTTLG  300
CSLGVNGSSH LCVSDRCCVC RIIRNGSFGK PELTGGIGVF TTSTSWRALE CVEPDPENAM  360
YVRKALIVCR VIAGRVHKPM ENIQEIAAQT GFDSLAGKVG VYSNIEELYL LNPRALLPCF  420
VVICKT
Cis-element ? help Back to Top
SourceLink
PlantRegMapKZV27238.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_021606656.10.0uncharacterized protein LOC110610892
TrEMBLA0A2Z7B0X10.0A0A2Z7B0X1_9LAMI; Uncharacterized protein
STRINGMigut.M01820.1.p0.0(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA22442235
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G27240.11e-159C2H2 family protein