PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | KZV26830.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Gesneriaceae; Didymocarpoideae; Trichosporeae; Loxocarpinae; Dorcoceras
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Family | ERF | ||||||||
Protein Properties | Length: 166aa MW: 18045.4 Da PI: 9.7655 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 62.7 | 8.1e-20 | 15 | 64 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 ++kGVr +k +g+WvAe+r p++ r r++lg++ t+eeAa+a++aa+ +l+g KZV26830.1 15 HFKGVRMRK-WGKWVAEVRQPKS---RDRIWLGSYETPEEAARAYDAAMVCLRG 64 69*****99.*******999854...4*************************98 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Pfam | PF00847 | 1.2E-13 | 15 | 64 | IPR001471 | AP2/ERF domain |
Gene3D | G3DSA:3.30.730.10 | 1.6E-29 | 15 | 73 | IPR001471 | AP2/ERF domain |
CDD | cd00018 | 3.17E-29 | 15 | 74 | No hit | No description |
PROSITE profile | PS51032 | 22.313 | 15 | 72 | IPR001471 | AP2/ERF domain |
SuperFamily | SSF54171 | 1.9E-21 | 15 | 73 | IPR016177 | DNA-binding domain |
SMART | SM00380 | 5.3E-36 | 15 | 78 | IPR001471 | AP2/ERF domain |
PRINTS | PR00367 | 3.8E-9 | 16 | 27 | IPR001471 | AP2/ERF domain |
PRINTS | PR00367 | 3.8E-9 | 38 | 54 | IPR001471 | AP2/ERF domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 166 aa Download sequence Send to blast |
MGRPDQSRKE RRVGHFKGVR MRKWGKWVAE VRQPKSRDRI WLGSYETPEE AARAYDAAMV 60 CLRGPSVVLN FPNDPPPSFL ASGDEFSRSQ IQVAASKHAR GMSAVPTPDT AAGMELVQPA 120 VQGMLFGESM EAGSSSLGQL RDGESCLQSG GGNTGGLFAT SRLWNF |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
5wx9_A | 1e-16 | 14 | 74 | 13 | 74 | Ethylene-responsive transcription factor ERF096 |
Search in ModeBase |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | KZV26830.1 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_012851158.1 | 3e-53 | PREDICTED: ethylene-responsive transcription factor ERF017-like | ||||
TrEMBL | A0A2Z7B0Q1 | 1e-118 | A0A2Z7B0Q1_9LAMI; Uncharacterized protein | ||||
STRING | Migut.J00902.1.p | 2e-46 | (Erythranthe guttata) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA21 | 24 | 1165 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G19210.1 | 4e-34 | ERF family protein |