PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID KZV26725.1
Organism
Dorcoceras hygrometricum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Gesneriaceae; Didymocarpoideae; Trichosporeae; Loxocarpinae; Dorcoceras
Family HD-ZIP
Protein Properties Length: 852aa    MW: 92954 Da    PI: 6.1854
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
KZV26725.1genomeCNUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox66.82.8e-21133188156
                 TT--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
    Homeobox   1 rrkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 
                 +++ +++t++q++eLe lF+++++p++++r eL+k+l L+ rqVk+WFqNrR+++k
  KZV26725.1 133 KKRYHRHTPQQIQELEGLFKECPHPDEKQRMELSKRLCLDSRQVKFWFQNRRTQMK 188
                 688999***********************************************999 PP
2START181.93.6e-573435951206
                 HHHHHHHHHHHHHHHHC-TT-EEEE....EXCCTTEEEEEEESSS......SCEEEEEEEECCSCHHHHHHHHHCCCGGCT-TT-S....EEEEEEEEC CS
       START   1 elaeeaaqelvkkalaeepgWvkss....esengdevlqkfeeskv.....dsgealrasgvvdmvlallveellddkeqWdetla....kaetlevis 86 
                 ela++a++elvk+a+++ep+Wv+      e +n +e+l++f++  +     + +ea+r++g+v+ ++  lve+l+d++ +W e+++    + +tl+vis
  KZV26725.1 343 ELALAAMDELVKMAQSDEPLWVRTLeggrEVLNHEEYLRTFTPCIGmkpigFVSEASRETGLVIINSLALVETLMDSN-KWAEMFPcivaRTTTLDVIS 440
                 5899*********************9**9*************9999********************************.******************** PP

                 TT......EEEEEEEEXXTTXX-SSX.EEEEEEEEEEE.TTS-EEEEEEEEE-TTS--..-TTSEE-EESSEEEEEEEECTCE................ CS
       START  87 sg......galqlmvaelqalsplvp.RdfvfvRyirqlgagdwvivdvSvdseqkppe.sssvvRaellpSgiliepksngh................ 161
                 +g      gal+lm+ae q+lsplvp R++ f+R+++q+ +g+w++vdvS+d + +++   + +  +++lpSg+++++++ng+                
  KZV26725.1 441 NGmggtrnGALHLMQAEIQVLSPLVPvREVNFLRFCKQHAEGVWAVVDVSIDTTGENSGgLPTIQNCRRLPSGCVVQDMPNGYskvsvfecdtgisilp 539
                 **********************************************************999************************************** PP

                 ...........EEEEEEE-EE--SSXXHHHHHHHHHHHHHHHHHHHHHHTXXXXXX CS
       START 162 ...........skvtwvehvdlkgrlphwllrslvksglaegaktwvatlqrqcek 206
                              vtwveh++++++++h l+r++++ gl +g ++wva+lqrqce+
  KZV26725.1 540 qkkfknnvteaKSVTWVEHTEYDESVIHHLYRPFISEGLGFGSQRWVAALQRQCEC 595
                 ********99878*****************************************96 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF466891.92E-20116190IPR009057Homeodomain-like
Gene3DG3DSA:1.10.10.601.1E-21119190IPR009057Homeodomain-like
PROSITE profilePS5007117.2130190IPR001356Homeobox domain
SMARTSM003891.2E-16131194IPR001356Homeobox domain
CDDcd000868.72E-18132190No hitNo description
PfamPF000469.6E-19133188IPR001356Homeobox domain
PROSITE patternPS000270165188IPR017970Homeobox, conserved site
PROSITE profilePS5084840.138334598IPR002913START domain
SuperFamilySSF559615.68E-27336522No hitNo description
CDDcd088753.54E-114338594No hitNo description
PfamPF018524.2E-49343595IPR002913START domain
SMARTSM002344.3E-44343595IPR002913START domain
SuperFamilySSF559615.68E-27550595No hitNo description
SuperFamilySSF559611.25E-22624845No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0008289Molecular Functionlipid binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 852 aa     Download sequence    Send to blast
MNFGDFLDNN SCGGGGARIG ANIPYSDSST TIKTITLMSN INSMPTGAIA QPRLLSQSLA  60
AKPIFNSSGL SLALETGAGA GQGEVARMGE TFEFGNVGGR KMRDEEHESR SGSDNMDGAS  120
GDEQDAADKP SRKKRYHRHT PQQIQELEGL FKECPHPDEK QRMELSKRLC LDSRQVKFWF  180
QNRRTQMKTQ LERHENSLLR QENDKLRTEN MSIREAMRNP MCTNCGGPAI IGDISLEEQH  240
LRIENARLKD ELDRVCVLAG KFLGRPISSM TVSMVPPMPN SSLELGVGNN GFGILNAMPS  300
SLPLAPPDFC VGISNSLPLV PPAKATMNVA PIERSLERSM YLELALAAMD ELVKMAQSDE  360
PLWVRTLEGG REVLNHEEYL RTFTPCIGMK PIGFVSEASR ETGLVIINSL ALVETLMDSN  420
KWAEMFPCIV ARTTTLDVIS NGMGGTRNGA LHLMQAEIQV LSPLVPVREV NFLRFCKQHA  480
EGVWAVVDVS IDTTGENSGG LPTIQNCRRL PSGCVVQDMP NGYSKVSVFE CDTGISILPQ  540
KKFKNNVTEA KSVTWVEHTE YDESVIHHLY RPFISEGLGF GSQRWVAALQ RQCECLAILM  600
SSADSSRDQA AAISGGGRRS MLKLAQRMTT NFCAGVCAST VHKWNKLRTD SVGEDVRVMT  660
RRSIDDPGEP SGIVLSASTS VWLPVSPHRV FDFLRNVSLR CEWDILSHGG PMQEMAHIAK  720
GQDQGNCVSL LRASAINADQ SNMLILQETC IDAAGSLVVY APVDNPAMHV VLNGGDPAYV  780
ALLPSGFAIV ADGPDSKDSP ARRVNGSLLT VAFQILVNSL PSSKLTLESV ETVNNLISCT  840
VQKIKSALQC ET
Functional Description ? help Back to Top
Source Description
UniProtProbable transcription factor involved in the regulation of the tissue-specific accumulation of anthocyanins and in cellular organization of the primary root. {ECO:0000269|PubMed:10402424}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapKZV26725.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011093166.10.0homeobox-leucine zipper protein ANTHOCYANINLESS 2 isoform X1
SwissprotQ0WV120.0ANL2_ARATH; Homeobox-leucine zipper protein ANTHOCYANINLESS 2
TrEMBLA0A2Z7AY040.0A0A2Z7AY04_9LAMI; Homeobox-leucine zipper protein ANTHOCYANINLESS 2-like
STRINGPGSC0003DMT4000713770.0(Solanum tuberosum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA16262465
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G00730.10.0HD-ZIP family protein
Publications ? help Back to Top
  1. Duarte JM, et al.
    Expression pattern shifts following duplication indicative of subfunctionalization and neofunctionalization in regulatory genes of Arabidopsis.
    Mol. Biol. Evol., 2006. 23(2): p. 469-78
    [PMID:16280546]