PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID KZV26542.1
Organism
Dorcoceras hygrometricum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Gesneriaceae; Didymocarpoideae; Trichosporeae; Loxocarpinae; Dorcoceras
Family ERF
Protein Properties Length: 150aa    MW: 17001 Da    PI: 8.0212
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
KZV26542.1genomeCNUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP268.51.2e-212072156
         AP2  1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56
                ++y+GVr+++ +g+++AeIrdps +g  +r +lg+f+taeeAa+a+++a+ kl+g+
  KZV26542.1 20 TRYRGVRRRP-WGKFAAEIRDPSRQG--ARLWLGTFDTAEEAARAYDKAAFKLRGH 72
                68********.**********96543..**************************97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF008478.4E-162072IPR001471AP2/ERF domain
CDDcd000182.50E-302080No hitNo description
Gene3DG3DSA:3.30.730.101.6E-322181IPR001471AP2/ERF domain
PROSITE profilePS5103225.4492179IPR001471AP2/ERF domain
SMARTSM003809.5E-392185IPR001471AP2/ERF domain
SuperFamilySSF541712.09E-242180IPR016177DNA-binding domain
PRINTSPR003679.1E-122233IPR001471AP2/ERF domain
PRINTSPR003679.1E-124561IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0010200Biological Processresponse to chitin
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 150 aa     Download sequence    Send to blast
MEGTSRGKAM QERDDKKEET RYRGVRRRPW GKFAAEIRDP SRQGARLWLG TFDTAEEAAR  60
AYDKAAFKLR GHLAILNFPN EYYSQLTIPP YNPRFSPAFP ASSSSTSSSM VGSYYCCSAG  120
GKERIELECL DDSLLEELLE DSSLEKKNNK
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5wx9_A2e-3018821175Ethylene-responsive transcription factor ERF096
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtProbably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). {ECO:0000250}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapKZV26542.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011091225.14e-65ethylene-responsive transcription factor ERF098-like
SwissprotQ9LTC52e-43ERF98_ARATH; Ethylene-responsive transcription factor ERF098
TrEMBLA0A2Z7B4V21e-106A0A2Z7B4V2_9LAMI; Uncharacterized protein
STRINGXP_009780511.11e-52(Nicotiana sylvestris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA21241165
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G23230.12e-31ERF family protein
Publications ? help Back to Top
  1. Van den Broeck L, et al.
    From network to phenotype: the dynamic wiring of an Arabidopsis transcriptional network induced by osmotic stress.
    Mol. Syst. Biol., 2017. 13(12): p. 961
    [PMID:29269383]