PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID KZV26200.1
Organism
Dorcoceras hygrometricum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Gesneriaceae; Didymocarpoideae; Trichosporeae; Loxocarpinae; Dorcoceras
Family TALE
Protein Properties Length: 683aa    MW: 75655.3 Da    PI: 5.2477
Description TALE family protein
Gene Model
Gene Model ID Type Source Coding Sequence
KZV26200.1genomeCNUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox28.33e-094394761954
                 HHH..SSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS
    Homeobox  19 Fek..nrypsaeereeLAkklgLterqVkvWFqNrRak 54 
                 Fe   ++yp+ +++  LA+++gLt +qV++WF N R +
  KZV26200.1 439 FEHflHPYPKDSDKIMLARQTGLTRSQVSNWFINARVR 476
                 664459******************************88 PP
2BELL1201.1e-38301372172
        BELL   1 erqelqkkkakLlslleeVdkrYkqyveqlqtvissFeavaglgsakpYtslAlkaiSrhFrcLkdaiaeqi 72 
                 e+q+lq+k +kLl +l+eVd+rYkqy++q+++v+ssF+++ag g+akpYt+lAl +iSrhFrcL+dai +qi
  KZV26200.1 301 EKQDLQNKLTKLLAMLDEVDRRYKQYYHQMKIVVSSFDMIAGSGAAKPYTALALLTISRHFRCLRDAINGQI 372
                 6899******************************************************************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM005741.4E-54221370IPR006563POX domain
PfamPF075261.5E-47227368IPR006563POX domain
PROSITE profilePS5007112.001417480IPR001356Homeobox domain
SMARTSM003891.6E-9420484IPR001356Homeobox domain
CDDcd000869.53E-13420481No hitNo description
SuperFamilySSF466892.69E-17421487IPR009057Homeodomain-like
Gene3DG3DSA:1.10.10.601.2E-28423486IPR009057Homeodomain-like
PfamPF059204.6E-18437476IPR008422Homeobox KN domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0044212Molecular Functiontranscription regulatory region DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 683 aa     Download sequence    Send to blast
MLAKKEILET KFMAAYFPTS NSESDGATML YSRDTLPGSY SETSVISGNT MMYMNFSPSS  60
GSLPDALTGN SQRQSACLEI QHTGNSEPGS SQQEIMLNFG GSRIVERDLS SWKDGRNEML  120
MMHPINGAPS VLQGQGLSLS LGSQIPSGMQ LPPIPYQNDT SSFSPFLGPN PSISNDERGG  180
SQSFEEDDNS RTRQLIYNDY MLSCIQGANA DAIKSESYGM SSMTRAIPSS KYLKAAQQLL  240
DEVVNVKKAI KEQNSKKELV KDSKEADGGL GDGDSDPSQA GIYSVPPESS SNSAIELPAD  300
EKQDLQNKLT KLLAMLDEVD RRYKQYYHQM KIVVSSFDMI AGSGAAKPYT ALALLTISRH  360
FRCLRDAING QIQVVRKSLG EQDDSSNGKG IVISRLRYVD KQLRQQRALQ QLGMMPHHAW  420
RPQRGLPETS VSILRAWLFE HFLHPYPKDS DKIMLARQTG LTRSQVSNWF INARVRLWKP  480
MVEEMYKEET GDTEVDSNSS SETTPRTAKT DAKTSQDKGE DFQQTSASSS QHLASNSIPL  540
ADIEMMEQDN NPTFQPPSKY CTRKSGDGQR HIDETTLFHD SMGHSNYDPD RFIEAAYHMS  600
EFERFGSGSG KISLTLGLQQ SAGGNIPICN ESRNGFVNIR GSDAYNASDL GMETEAAAEF  660
DCMDSENRQQ RFVPARLLHD FVA
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
4xrs_A1e-16426483158Homeobox protein Meis1
4xrs_B1e-16426483158Homeobox protein Meis1
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapKZV26200.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_023920729.10.0BEL1-like homeodomain protein 6
RefseqXP_023920730.10.0BEL1-like homeodomain protein 6
TrEMBLA0A2Z7AZ080.0A0A2Z7AZ08_9LAMI; Uncharacterized protein
STRINGEOX979220.0(Theobroma cacao)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA102052226
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G34610.21e-129BEL1-like homeodomain 6