PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID KZV25846.1
Organism
Dorcoceras hygrometricum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Gesneriaceae; Didymocarpoideae; Trichosporeae; Loxocarpinae; Dorcoceras
Family bZIP
Protein Properties Length: 286aa    MW: 32225.7 Da    PI: 10.0928
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
KZV25846.1genomeCNUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_130.96e-10442745
                HHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
      bZIP_1  7 errkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaL 45
                 rr+++NReAAr+sR+RKka++++Le    +L++  ++L
  KZV25846.1  4 LRRLAQNREAARKSRLRKKAYVQQLESSRMKLTQLEQEL 42
                69************************9888888777655 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS502178.921144IPR004827Basic-leucine zipper domain
SMARTSM003380.0025161IPR004827Basic-leucine zipper domain
PfamPF001703.8E-7343IPR004827Basic-leucine zipper domain
SuperFamilySSF579593.75E-7445No hitNo description
Gene3DG3DSA:1.20.5.1705.9E-8547No hitNo description
PROSITE patternPS000360520IPR004827Basic-leucine zipper domain
PfamPF141441.9E-2985159IPR025422Transcription factor TGA like domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0009410Biological Processresponse to xenobiotic stimulus
GO:0045892Biological Processnegative regulation of transcription, DNA-templated
GO:0045893Biological Processpositive regulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0005737Cellular Componentcytoplasm
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 286 aa     Download sequence    Send to blast
MQTLRRLAQN REAARKSRLR KKAYVQQLES SRMKLTQLEQ ELQRARQQGI FISSSGDQAQ  60
SIAGNGALTF DVEYARWMED HNRRINELRG AVNSHAGDGE LRLIVEGITT QYDDIFRLKA  120
DAAKTDVFHI LSGMWKTPAE RCFLWLGGFR SSELLKLLIN HLEPLTEQQL LAMNNLQQSS  180
QQAEDALSQG MEALQLSLAE TLAGSLSPSS SSGNVANYMG QMAMAMGKLG TLEGFIRQAD  240
NLRQQTLQQM HRILTTRQSA RALLAISDYF SRLRALSSLW LARPRE
Functional Description ? help Back to Top
Source Description
UniProtTranscriptional activator that binds specifically to the DNA sequence 5'-TGACG-3'. Recognizes ocs elements like the as-1 motif of the cauliflower mosaic virus 35S promoter. Binding to the as-1-like cis elements mediate auxin- and salicylic acid-inducible transcription. Binds to the hexamer motif 5'-ACGTCA-3' of histone gene promoters.
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00492DAPTransfer from AT5G06950Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMapKZV25846.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_027078852.10.0transcription factor TGA2.2-like isoform X1
RefseqXP_027078862.10.0transcription factor TGA2.2-like isoform X1
RefseqXP_027078869.10.0transcription factor TGA2.2-like isoform X2
RefseqXP_027161661.10.0transcription factor TGA2.2-like
SwissprotQ415581e-169HBP1C_WHEAT; Transcription factor HBP-1b(c1) (Fragment)
TrEMBLA0A2Z7AWS40.0A0A2Z7AWS4_9LAMI; Transcription factor HBP-1b(C1)-like
STRINGMigut.F00128.1.p0.0(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA8202385
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G06950.41e-141bZIP family protein