PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID KZV24654.1
Organism
Dorcoceras hygrometricum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Gesneriaceae; Didymocarpoideae; Trichosporeae; Loxocarpinae; Dorcoceras
Family bHLH
Protein Properties Length: 435aa    MW: 48885.1 Da    PI: 5.7519
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
KZV24654.1genomeCNUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH16.21.9e-053263631254
                 HHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
         HLH  12 RRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                 R +++ +++  L++l+ +      +K + a++L +A+eYI+ L
  KZV24654.1 326 RKEKLGDRITALQQLVSPF-----GKTDTASVLHEAIEYIRFL 363
                 677888999*******998.....8****************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088811.884314363IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000837.24E-6324368No hitNo description
SuperFamilySSF474591.96E-11324376IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.101.1E-8328371IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0042631Biological Processcellular response to water deprivation
GO:0045893Biological Processpositive regulation of transcription, DNA-templated
GO:0071215Biological Processcellular response to abscisic acid stimulus
GO:0071472Biological Processcellular response to salt stress
GO:2000214Biological Processregulation of proline metabolic process
GO:2000377Biological Processregulation of reactive oxygen species metabolic process
GO:0005634Cellular Componentnucleus
GO:0001046Molecular Functioncore promoter sequence-specific DNA binding
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 435 aa     Download sequence    Send to blast
MAEEFQVCSG NWWNSPRNLF GSSPCSWAVN DFAGNLGWPS ICNEPVILDM NNTVISSDDS  60
AGSASDGSCT TLQDIPKTHQ QVSDRSLSTD CWNQDFLHES ARSEDNYPQI MDYRQENWIN  120
PKNFYELSST PLKQLHQDFS TQSQQLSNSI DSFAETCGET SINFPLNSSS YSYTPSLMQN  180
LLGQDNSQPH ILPFLDDQEM NYLSEPNYDM NHNELLLSSL PKSSSMFIQP SRQHHSPYSN  240
NKRFWNATAS ALLTDSSNFI PSINPPILPS INNNIKHNIT DMSSAKRQEE SRDVASSVAK  300
KQTGSESAFK RPRIETPSPL PTFKVRKEKL GDRITALQQL VSPFGKTDTA SVLHEAIEYI  360
RFLHDQVKVL STPYMKNGSS PLQHQQAGNT SKERERLKQD LKSRGLCLVP ISSTFPVASE  420
TTSDFWTHTF GASFR
Cis-element ? help Back to Top
SourceLink
PlantRegMapKZV24654.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011086152.11e-126transcription factor bHLH112
TrEMBLA0A2Z7ARY60.0A0A2Z7ARY6_9LAMI; Uncharacterized protein
STRINGVIT_00s0274g00070.t011e-110(Vitis vinifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA8602486
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G61660.35e-55bHLH family protein