PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

KZV23490.1

Organism

Dorcoceras hygrometricum

Taxonomic ID

472368

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Gesneriaceae; Didymocarpoideae; Trichosporeae; Loxocarpinae; Dorcoceras

Family

HSF

Protein Properties

Length: 377aa MW: 43551.8 Da PI: 4.5107

Description

HSF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
KZV23490.1	genome	CNU	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HSF_DNA-bind	111.4	6.3e-35	14	105	2	102
HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXXXXXX CS HSF_DNA-bind 2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkellekik 98 Fl k ye+++de+++elisw+++++sf+++de++fa+++L+kyFkh+nf+SFvRQLn+YgFkk+++++ eF+++sF kg+k+ll++i KZV23490.1 14 FLVKCYEMVNDESTDELISWNDSNQSFIIWDESKFASELLHKYFKHNNFSSFVRQLNIYGFKKIDTDS---------CEFANDSFIKGQKHLLKNIT 101 9**************************************************************999.........67**************** PP XXXX CS HSF_DNA-bind 99 rkks 102 r+k+ KZV23490.1 102 RRKH 105 *986 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SuperFamily	SSF46785	5.9E-34	9	103	IPR011991	Winged helix-turn-helix DNA-binding domain
SMART	SM00415	1.5E-53	10	103	IPR000232	Heat shock factor (HSF)-type, DNA-binding
Gene3D	G3DSA:1.10.10.10	6.1E-36	11	103	IPR011991	Winged helix-turn-helix DNA-binding domain
PRINTS	PR00056	1.5E-17	14	37	IPR000232	Heat shock factor (HSF)-type, DNA-binding
Pfam	PF00447	6.9E-30	14	103	IPR000232	Heat shock factor (HSF)-type, DNA-binding
PRINTS	PR00056	1.5E-17	52	64	IPR000232	Heat shock factor (HSF)-type, DNA-binding
PROSITE pattern	PS00434	0	53	77	IPR000232	Heat shock factor (HSF)-type, DNA-binding
PRINTS	PR00056	1.5E-17	65	77	IPR000232	Heat shock factor (HSF)-type, DNA-binding

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0005634	Cellular Component	nucleus
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding
GO:0043565	Molecular Function	sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 377 aa Download sequence Send to blast
MVKSLENGTS LPPFLVKCYE MVNDESTDEL ISWNDSNQSF IIWDESKFAS ELLHKYFKHN 60 NFSSFVRQLN IYGFKKIDTD SCEFANDSFI KGQKHLLKNI TRRKHLQGQT QKNSSQSKKT 120 VPVAYEEEKR LALCKEVENL KIDRNAVTLE LKKLRQHQES SQSKLLLLRE QLKGMEKNQQ 180 QMLSFIVLAM QIPEFLEQFL KPMEKNWRIL EKGKNVLSEV TDDCETVPSD GTIVRYQPPT 240 DGEAMASTSN SEDFMDLDIS SDELRDLLVN IDFFSGSLDE KQLPLDNHGQ FVIPDLPEYD 300 TMLDQLLLSN PSTGNARFSD LEAEVFADPR IPLESNSQIK DSEQSNYSDE DVNNDHTRLQ 360 IEQHLETRMT NIDESFE

Sequence ? help Back to Top

Protein Sequence Length: 377 aa Download sequence Send to blast

MVKSLENGTS LPPFLVKCYE MVNDESTDEL ISWNDSNQSF IIWDESKFAS ELLHKYFKHN  60
NFSSFVRQLN IYGFKKIDTD SCEFANDSFI KGQKHLLKNI TRRKHLQGQT QKNSSQSKKT  120
VPVAYEEEKR LALCKEVENL KIDRNAVTLE LKKLRQHQES SQSKLLLLRE QLKGMEKNQQ  180
QMLSFIVLAM QIPEFLEQFL KPMEKNWRIL EKGKNVLSEV TDDCETVPSD GTIVRYQPPT  240
DGEAMASTSN SEDFMDLDIS SDELRDLLVN IDFFSGSLDE KQLPLDNHGQ FVIPDLPEYD  300
TMLDQLLLSN PSTGNARFSD LEAEVFADPR IPLESNSQIK DSEQSNYSDE DVNNDHTRLQ  360
IEQHLETRMT NIDESFE

3D Structure ? help Back to Top

PDB ID	Evalue	Query Start	Query End	Hit Start	Hit End	Description
5d5u_B	3e-26	9	103	24	129	Heat shock factor protein 1
5d5v_B	3e-26	9	103	24	129	Heat shock factor protein 1
5d5v_D	3e-26	9	103	24	129	Heat shock factor protein 1
Search in ModeBase

Cis-element ? help Back to Top
Source	Link
PlantRegMap	KZV23490.1

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_011070552.1	1e-159	heat stress transcription factor A-8
TrEMBL	A0A2Z7ARH9	0.0	A0A2Z7ARH9_9LAMI; Heat stress transcription factor A-8
STRING	Migut.E00498.1.p	1e-129	(Erythranthe guttata)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Asterids	OGEA12235	22	22

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G67970.1	2e-80	heat shock transcription factor A8