PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID KZV22512.1
Organism
Dorcoceras hygrometricum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Gesneriaceae; Didymocarpoideae; Trichosporeae; Loxocarpinae; Dorcoceras
Family ERF
Protein Properties Length: 154aa    MW: 17141.9 Da    PI: 10.2481
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
KZV22512.1genomeCNUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP265.88.3e-212172156
         AP2  1 sgykGVrwdkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaarkklege 56
                ++++GVr ++ +gr++AeIrd ++    ++r +lg+f+taeeAa a+++a++ l+g+
  KZV22512.1 21 PQFRGVRKRP-WGRYAAEIRDpWK----KTRKWLGTFDTAEEAAMAYDEAARTLRGA 72
                689*******.**********883....5*************************985 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF008473.4E-132171IPR001471AP2/ERF domain
CDDcd000183.99E-302181No hitNo description
Gene3DG3DSA:3.30.730.108.3E-312279IPR001471AP2/ERF domain
PROSITE profilePS5103221.8522279IPR001471AP2/ERF domain
SuperFamilySSF541715.3E-222280IPR016177DNA-binding domain
SMARTSM003801.9E-342285IPR001471AP2/ERF domain
PRINTSPR003673.1E-102334IPR001471AP2/ERF domain
PRINTSPR003673.1E-104561IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 154 aa     Download sequence    Send to blast
MVVERLENVA IAPPCFVNKG PQFRGVRKRP WGRYAAEIRD PWKKTRKWLG TFDTAEEAAM  60
AYDEAARTLR GAKAKTNFAY SGVSSVPPPL DVNVAGLRSK DLLLACGDTA ARRSVYTGYK  120
IEEVGAVVIN KQEKQMKSEK KPLLFDLNLP APLF
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2gcc_A4e-201978262ATERF1
3gcc_A4e-201978262ATERF1
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapKZV22512.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011082648.13e-73ethylene-responsive transcription factor 14
TrEMBLA0A2Z7ATH41e-109A0A2Z7ATH4_9LAMI; Uncharacterized protein
STRINGMigut.N02188.1.p4e-59(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA141361212
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G28360.13e-23ERF domain protein 12