PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID KZV22500.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Gesneriaceae; Didymocarpoideae; Trichosporeae; Loxocarpinae; Dorcoceras
Family HB-other
Protein Properties Length: 2023aa    MW: 225937 Da    PI: 5.6084
Description HB-other family protein
Gene Model
Gene Model ID Type Source Coding Sequence
KZV22500.1genomeCNUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox57.62.2e-18476532157
                 TT--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHHC CS
    Homeobox   1 rrkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakekk 57 
                 r kR+  t+ ql++Lee +  ++yps+++r+eL++kl+Lt+rq ++WF+ rR k+kk
  KZV22500.1 476 RPKRQMKTPFQLQVLEETYSVEMYPSEATRAELSEKLSLTDRQLQMWFCHRRLKDKK 532
                 579****************************************************98 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
TIGRFAMsTIGR008179.5E-130106404IPR004696Triose phosphate/phosphoenolpyruvate translocator
PfamPF031513.4E-109107394IPR004853Sugar phosphate transporter domain
SuperFamilySSF1034811.16E-5148243No hitNo description
SuperFamilySSF1034816.28E-5323395No hitNo description
Gene3DG3DSA:1.10.10.601.9E-17452533IPR009057Homeodomain-like
SuperFamilySSF466891.11E-16463533IPR009057Homeodomain-like
PROSITE profilePS5007116.39473533IPR001356Homeobox domain
SMARTSM003891.7E-17475537IPR001356Homeobox domain
PfamPF000465.8E-16476532IPR001356Homeobox domain
CDDcd000862.56E-14476533No hitNo description
PROSITE profilePS5082716.4869591018IPR018501DDT domain
SMARTSM005711.2E-209591018IPR018501DDT domain
PfamPF027911.1E-179601015IPR018501DDT domain
PfamPF050667.3E-1311411208IPR007759HB1/Asxl, restriction endonuclease HTH domain
PfamPF156123.0E-812991342IPR028942WHIM1 domain
PfamPF156131.7E-1114401512IPR028941WHIM2 domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0006810Biological Processtransport
GO:0010228Biological Processvegetative to reproductive phase transition of meristem
GO:0016021Cellular Componentintegral component of membrane
GO:0003677Molecular FunctionDNA binding
GO:0005215Molecular Functiontransporter activity
Sequence ? help Back to Top
Protein Sequence    Length: 2023 aa     Download sequence    Send to blast
MESRVISGVT VRGVALPPKP AARLNGNCML PAVRLSGKLT DAGNLICGRQ LRPAVLLEAS  60
PTTVPISVVA KRPGLQPCHA AASSPADGGD SAGEAKVGFF KKYPALVTGF FFFMWYFLNV  120
IFNIMNKKIY NYFPYPYFVS VIHLFVGVIY CLLSWTVGLP KRAPIDSTLL KLLIPVAVCH  180
AIGHVTSNVS FAAVAVSFTH TVKALEPFFN AAASQFILGQ QIPITLWLSL APVVIGVSMA  240
SLTELSFNWL GFISAMISNI SFTYRSIYSK KAMTDMDSTN LYAYISIIAL IVCIPPAVIL  300
EGPQLMQHGF NDAIHKVGLT KFITDLFWVG LFYHLYNQLA TNTLERVAPL THAVGNVLKR  360
VFVIGFSIIV FGNKISLQTG IGTSIAIAGV AIYSFIKAKM EEEKREGDPE VVQGGLGTKG  420
GCSTPNESRR VVEERNDDEV TYHGGLCPVI GSGMEAGSEG EIDRNVNQSP TEVSKRPKRQ  480
MKTPFQLQVL EETYSVEMYP SEATRAELSE KLSLTDRQLQ MWFCHRRLKD KKEAAGMGAT  540
KTPPSGSGGR KDLPESPKEE RMAAEPGSRH GSGSVSGSGS GSGSDLGSGS GSESSSGQFD  600
NGDDMPMVAA VYHEASRTNM ERRVIACVEA QLGEPLREDG PILGIEFDEL PPGAFGAPIG  660
IFFPAAICHC LRDYTASSND PHEIIESQVR SDAYRHVAAP YLYDSPVDDG STAKSLSVVH  720
ENGHLPREYV TGGLVSSVDI NSQSGRQVQF ASSPRNAGFI AHNDNSVQID RKRKNDEVRI  780
GREVQAHEKR LRKELEKQEI LRRKREEQMR KDMERQDRER RKEELRMIRE QQRQEEKFQR  840
EERREMERRE KFMQKERLRL ERRKQKEEHR KEKEAARQKA AVERAAARRM AKESLELIED  900
DRLELMELAA SSKGLPSIVS LDYNTLQNLE SFREHMCDFP PKSVQLRMPF ATEPWVNSEE  960
NVGNLLMVWK FFVTFADVLG LWPFTLDEFL QAFHDYDSRL LCEIHIALLK LIVKDIEDVV  1020
RTPSGGPGTN QYSAVNPEGG HPRVVEGAYL WGFDIRNWQK HLNPLTWHEI LRQFALSAGF  1080
GPRLKKKVND RVSVNDVKEG KSCEDIVSTL RNGSAAENAI AIMQEKGFTL QRKSRHRLTP  1140
GTVKFAAYHV LALEGSRGLN VIDLAEKIQK SGLRDLTTSK TPEASISVAL SRDPILFERI  1200
APSTYCVRPA FRKDPADAES IIAAAKEKIQ KYAHGILSGQ NVDEEERDDD SESDIAEGAE  1260
VDAAATPFDG NENGECSNFG SFPKNVRLDQ GVEIDESGSG EPWVQGVTEG EYSDLSVEER  1320
LNALVALIGV ANEGNSIRVI LEDRMDAANA LKKQMWAEAQ IDKRRMREEI IYDPQTIILE  1380
KDLSSVVAGD TQNPIDTLVQ DAAVVQFVSP LQQNGCTSER SCSQLKSYIG HRAEEMYVYR  1440
SLPLGQDRRR NRYWQFVASA SSLDPGWGQI FFESPTGYWR LINSEEAFDS LLKSLDTRGA  1500
RESHLHIMLQ KIEVYFKECV RRNQFLTLTD QTINGGEDVA FEVIASVASA SIEIPSSDFC  1560
STRSDSWQPS TSFKFGCGRN ESKEKNLLKR YEDLRIWTWK ECFNPSNLRA QRYGKIWRMP  1620
LLGTCDVCLD IYNADLCPRC HWMHSHIDDR GKFSGDDLIE TNIDSLNSTS PIMRLIKAVL  1680
TFLEACIPSE GLHSFWTEEC RNSWGLKLQI ASSPKDLLQL LTQFEGAIKR DYLSADFETT  1740
EELLCYCASS RGATYAFACS GSALQLPWIP ETTAAKSASG KAFSNDVERA ETLEFDKYGL  1800
IKEDSRDRLH ETPSSFGYRN IRTRGGGRQR KKSQRGVKRP TSQSSRRSTK QSEALTILMQ  1860
QGVRTNGQRH GRGPRTIRRR RTEKKAVAEI LQDCLDNEST LKNKADKPRN SGGEELVNFS  1920
SKNTGTENDD NSIGMEAGDT DDDSNENLYE TAKWGTSPYD ATPNRSNEMM EMSEEEAEEI  1980
ENENGYYEEE GEDMELNGDD SDRDGDEIGD EESESAVSGE YSD
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5y78_A1e-7310641018324Putative hexose phosphate translocator
5y78_B1e-7310641018324Putative hexose phosphate translocator
5y79_A1e-7310641018324Putative hexose phosphate translocator
5y79_B1e-7310641018324Putative hexose phosphate translocator
Search in ModeBase
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1525532RRLKDKKE
Functional Description ? help Back to Top
Source Description
UniProtTranscriptional regulator required for the maintenance of the plant vegetative phase. In association with CHR11 or CHR17 may prevent the early activation of the vegetative-to-reproductive transition by regulating key genes that contribute to flower timing, such as FT, SEP1, SEP3, AGL8/FUL, SOC1 and FLC. {ECO:0000269|PubMed:22694359}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapKZV22500.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011096358.10.0homeobox-DDT domain protein RLT1 isoform X2
SwissprotF4HY560.0RLT1_ARATH; Homeobox-DDT domain protein RLT1
TrEMBLA0A2Z7AMX70.0A0A2Z7AMX7_9LAMI; Uncharacterized protein
STRINGMigut.M01107.1.p0.0(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA21422352
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G28420.10.0homeobox-1