PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | KZV22394.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Gesneriaceae; Didymocarpoideae; Trichosporeae; Loxocarpinae; Dorcoceras
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Family | ERF | ||||||||
Protein Properties | Length: 368aa MW: 40680.8 Da PI: 5.5877 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 54.5 | 3e-17 | 54 | 103 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 +y+GVr+++ +gr++AeIrdp + r +lg+++taeeAa a++ a+++++g KZV22394.1 54 RYRGVRRRP-WGRYAAEIRDPQ----SkERRWLGTYDTAEEAACAYDCAARAMRG 103 59*******.**********93....35999**********************97 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM00380 | 3.5E-33 | 54 | 117 | IPR001471 | AP2/ERF domain |
SuperFamily | SSF54171 | 5.17E-21 | 54 | 111 | IPR016177 | DNA-binding domain |
Pfam | PF00847 | 7.1E-11 | 54 | 103 | IPR001471 | AP2/ERF domain |
Gene3D | G3DSA:3.30.730.10 | 7.4E-29 | 54 | 110 | IPR001471 | AP2/ERF domain |
PROSITE profile | PS51032 | 22.062 | 54 | 111 | IPR001471 | AP2/ERF domain |
CDD | cd00018 | 1.11E-29 | 54 | 110 | No hit | No description |
PRINTS | PR00367 | 4.4E-9 | 55 | 66 | IPR001471 | AP2/ERF domain |
PRINTS | PR00367 | 4.4E-9 | 77 | 93 | IPR001471 | AP2/ERF domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0009733 | Biological Process | response to auxin | ||||
GO:0009880 | Biological Process | embryonic pattern specification | ||||
GO:0048825 | Biological Process | cotyledon development | ||||
GO:0051726 | Biological Process | regulation of cell cycle | ||||
GO:0003677 | Molecular Function | DNA binding | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 368 aa Download sequence Send to blast |
MAEPSRRLNA AALMANMSEP ASPAPKRSIN PSSTGANKRA LKETAATTAG GTIRYRGVRR 60 RPWGRYAAEI RDPQSKERRW LGTYDTAEEA ACAYDCAARA MRGVKARTNF VYTSSSANRA 120 APENLHRPYG HLRSSQPYVG DMGPFQLVPS CSSRDPSFLH YNGSGHVRSR DPTDMVMFCD 180 HFNSQYNPNS SNFNVPFQEQ TTDPIPNTFL ESSCNLATQV SENSFSGSTL TTSGGICGND 240 EFDCLDFFRT ERSDSGLLQE VLHGFFPKPP DVNAEEPLQT PAHSRPPPPD ISDSSVKLEN 300 HEYLEDIHNF SSMDCQINSP HFDNFQSAAC SFLGIDSSFM SPSADDFPVV DYSYQGNWES 360 TFLTGNKL |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
5wx9_A | 5e-18 | 54 | 110 | 14 | 71 | Ethylene-responsive transcription factor ERF096 |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | KZV22394.1 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_011086646.1 | 5e-79 | ethylene-responsive transcription factor ESR2-like | ||||
TrEMBL | A0A2Z7AKQ6 | 0.0 | A0A2Z7AKQ6_9LAMI; Uncharacterized protein |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA21 | 24 | 1165 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G24590.1 | 4e-12 | DORNROSCHEN-like |