PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID KZV22327.1
Organism
Dorcoceras hygrometricum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Gesneriaceae; Didymocarpoideae; Trichosporeae; Loxocarpinae; Dorcoceras
Family ARR-B
Protein Properties Length: 637aa    MW: 69781.6 Da    PI: 5.9577
Description ARR-B family protein
Gene Model
Gene Model ID Type Source Coding Sequence
KZV22327.1genomeCNUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like72.17.9e-23210259151
     G2-like   1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQ 51 
                 kpr++Wt+eLH +F++av++L G+ekA+Pk+ilelm+v+ L++e+v+SHLQ
  KZV22327.1 210 KPRVVWTSELHVKFMNAVDKL-GIEKAVPKKILELMNVPALSRENVASHLQ 259
                 79*******************.***************************** PP
2Response_reg74.34.8e-25301381109
                   EEEESSSHHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHH..ESEEEEESSCTTSEHHHHHHHHHHHTTTSEEEEEESTTTHHHHHHHHHTTES CS
  Response_reg   1 vlivdDeplvrellrqalekegyeevaeaddgeealellkekd..pDlillDiempgmdGlellkeireeepklpiivvtahgeeedalealkaGak 95 
                   vl+vdD+p+ +++++++l +  y ev+ +  +e al++l++++  +D+++ D+ mp+mdG++ll++   e  +lp+i+++a ++++ + + +  Ga 
    KZV22327.1  30 VLVVDDDPTCLRIMEKMLGNCLY-EVTKCNCAELALQYLRDNKngVDVVISDVHMPDMDGFKLLEQVGLEM-DLPVIMMSADDSKDVVMKGVTHGAC 124
                   89*********************.***************888889**********************6644.8************************ PP

                   EEEESS--HHHHHH CS
  Response_reg  96 dflsKpfdpeelvk 109
                   d+l Kp+ +e++ +
    KZV22327.1 125 DYLIKPVRMEAIKN 138
                   ********999976 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PIRSFPIRSF0363929.6E-1509627IPR017053Response regulator B-type, plant
Gene3DG3DSA:3.40.50.23002.0E-4027181No hitNo description
SuperFamilySSF521722.7E-3327150IPR011006CheY-like superfamily
SMARTSM004484.6E-2928140IPR001789Signal transduction response regulator, receiver domain
PROSITE profilePS5011041.05129144IPR001789Signal transduction response regulator, receiver domain
PfamPF000722.5E-2230138IPR001789Signal transduction response regulator, receiver domain
CDDcd001561.64E-2631143No hitNo description
SuperFamilySSF466891.24E-14207260IPR009057Homeodomain-like
Gene3DG3DSA:1.10.10.605.3E-22208259IPR009057Homeodomain-like
TIGRFAMsTIGR015573.0E-22210260IPR006447Myb domain, plants
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0000160Biological Processphosphorelay signal transduction system
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 637 aa     Download sequence    Send to blast
MSLEVKPMFS SSSLKSGDGF SDQFPVGLRV LVVDDDPTCL RIMEKMLGNC LYEVTKCNCA  60
ELALQYLRDN KNGVDVVISD VHMPDMDGFK LLEQVGLEMD LPVIMMSADD SKDVVMKGVT  120
HGACDYLIKP VRMEAIKNIW QHVVRKKKHE GKDKDFVNSG GVEDEDQKQK VFEDGDYSSS  180
ANEGNSNSRK RKVEEDDDAE ERDDVSTHKK PRVVWTSELH VKFMNAVDKL GIEKAVPKKI  240
LELMNVPALS RENVASHLQV EQFFHHNRRV DSITRFMGPP NAAFGNASAF NGVDIQGLAA  300
ARQLQQQNLA AIQAAALGRA STKVSVSLPS HDNRNIFNFE NPRLNNDNKQ IDLLHGIPTT  360
MDPKQLASLR QSASTFGHMN MHVPSPAVQN NPSMNQMLQQ SRIQGLNGQS LNAAINSNHV  420
SNLPANVVQS VLSTAIPSTV LGRNGIGNVQ GPVYTSSSVP SSGVGLITEF PSNSFSFLSN  480
SGTPAVTSKG MFQNMKSEIR GPRALVPSHG AFNELNMNMI QDWGMQNAGL TFESPLRSNM  540
GVLGISPSTL VQQGFSSNSK NVQGQSKSPI VNSSLSENPL RNEDERIPNT GFENGLFPEQ  600
YIQEDDLMTA LLKQQDGTGH VEGEFGFGGF HLDTLPQ
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1irz_A1e-19206259154ARR10-B
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapKZV22327.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011100813.10.0two-component response regulator ARR2 isoform X2
TrEMBLA0A2Z7ASG90.0A0A2Z7ASG9_9LAMI; Two-component response regulator
STRINGPGSC0003DMT4000605060.0(Solanum tuberosum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA31912450
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G16110.11e-104response regulator 2