PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID KZV22053.1
Organism
Dorcoceras hygrometricum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Gesneriaceae; Didymocarpoideae; Trichosporeae; Loxocarpinae; Dorcoceras
Family C2H2
Protein Properties Length: 264aa    MW: 28621.3 Da    PI: 8.8228
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
KZV22053.1genomeCNUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H212.30.00052185207123
                 EEETTTTEEESSHHHHHHHHHHT CS
     zf-C2H2   1 ykCpdCgksFsrksnLkrHirtH 23 
                 ++C +Cg  F++   L  H+r+H
  KZV22053.1 185 HVCMHCGAEFTSGQALGGHMRRH 207
                 79********************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF576673.8E-8102125No hitNo description
PfamPF139121.0E-10103127IPR007087Zinc finger, C2H2
PROSITE profilePS5015710.637103130IPR007087Zinc finger, C2H2
SMARTSM003550.31103125IPR015880Zinc finger, C2H2-like
PROSITE patternPS000280105125IPR007087Zinc finger, C2H2
SuperFamilySSF576673.8E-8180207No hitNo description
PfamPF139121.8E-10185209IPR007087Zinc finger, C2H2
PROSITE profilePS501579.203185207IPR007087Zinc finger, C2H2
SMARTSM003550.026185207IPR015880Zinc finger, C2H2-like
PROSITE patternPS000280187207IPR007087Zinc finger, C2H2
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046872Molecular Functionmetal ion binding
Sequence ? help Back to Top
Protein Sequence    Length: 264 aa     Download sequence    Send to blast
MESEEDKNLF PIVRAKRTKR YMIHSPIAFA AEPPGVDDHN AATISPASVS SEESTTTGVE  60
DTARCLILLA QGRHLSAGHT QNNVNAAVQD GGGGQQAKES GLYACKTCNR AFRSFQALGG  120
HRASHKKPKN ERKVALSLNE DDFRSPLLSS SKKRMLSGYL SLQLNNFPST VDFATPKTAS  180
SPRIHVCMHC GAEFTSGQAL GGHMRRHRSG LVTPSSNPTA ACIYIEKHDR RMITSENEEL  240
NKAGNGLTLD LNLPAPELVL TLKD
Cis-element ? help Back to Top
SourceLink
PlantRegMapKZV22053.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011077260.17e-66zinc finger protein ZAT5
TrEMBLA0A2Z7AK200.0A0A2Z7AK20_9LAMI; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA40152343
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G28200.11e-30C2H2 family protein