PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID KZV21834.1
Organism
Dorcoceras hygrometricum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Gesneriaceae; Didymocarpoideae; Trichosporeae; Loxocarpinae; Dorcoceras
Family ERF
Protein Properties Length: 310aa    MW: 34476 Da    PI: 7.6277
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
KZV21834.1genomeCNUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP261.32.1e-193080256
         AP2  2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkklege 56
                ++ GVr+++ +grWvAeI+d s    +  r +lg+++t+e+Aa+a+++a+++l+ge
  KZV21834.1 30 RFVGVRQRP-SGRWVAEIKDSS----QgVRLWLGTYDTPEDAARAYDEAARALRGE 80
                589******.7*********42....24**************************97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF008475.7E-143080IPR001471AP2/ERF domain
PROSITE profilePS5103220.3233087IPR001471AP2/ERF domain
CDDcd000186.61E-323088No hitNo description
Gene3DG3DSA:3.30.730.101.8E-283087IPR001471AP2/ERF domain
SMARTSM003802.6E-353093IPR001471AP2/ERF domain
PRINTSPR003675.8E-73142IPR001471AP2/ERF domain
SuperFamilySSF541714.51E-203187IPR016177DNA-binding domain
PRINTSPR003675.8E-75369IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 310 aa     Download sequence    Send to blast
MDGCETTNSI IATSHKNKPQ RTKSTTQQRR FVGVRQRPSG RWVAEIKDSS QGVRLWLGTY  60
DTPEDAARAY DEAARALRGE NARTNFAVMS LKADPPESNN SNTYSSSTDH ADTKHGLSFS  120
SLKARLSKNL QSIMARKSEN KPNKSRVSDH FTFANFFHFK GYNQYNQNPY PDDIMKNIDK  180
KVVQPSVIVP HACNEQSSLE SSSMSDYSNE WGSSRHLSLD NSDGSDIGEL YGINELVLWG  240
DQMMPGCRIS SPDQVMSPEI GDEFSRSKRF KVSSSVVVPP TFSESTSYGS NDVFGPTNLT  300
GFPEPNTKSI
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5wx9_A2e-1430861471Ethylene-responsive transcription factor ERF096
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapKZV21834.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011094665.11e-111ethylene-responsive transcription factor ERF087-like
TrEMBLA0A2Z7AJ880.0A0A2Z7AJ88_9LAMI; Uncharacterized protein
STRINGXP_002511793.19e-93(Ricinus communis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA125641721
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G19790.19e-19related to AP2 11