PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | KZV21793.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Gesneriaceae; Didymocarpoideae; Trichosporeae; Loxocarpinae; Dorcoceras
|
||||||||
Family | B3 | ||||||||
Protein Properties | Length: 161aa MW: 18159.5 Da PI: 4.7515 | ||||||||
Description | B3 family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | B3 | 42.7 | 1e-13 | 42 | 133 | 1 | 97 |
EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTE.EEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE CS B3 1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgr.yvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvf 97 f+ vlt + +s+ l+lp + ae ++ ++ +tl+ +g++W+ + r+ s+r + + Wk F+++n+Lk gD +vF+l ++s+++l++kv+ KZV21793.1 42 FDVVLTEAQLQRSSALMLPGHIAELL---PRATVPVTLT-YNGKEWNSSY--RGESSRhPRFDSRWKVFARDNDLKCGDACVFELLENSKENLRFKVI 133 677888899999999****9999544...3444556654.59********..777777699***********************99999999999875 PP |
Protein Features ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:2.40.330.10 | 3.1E-15 | 39 | 136 | IPR015300 | DNA-binding pseudobarrel domain |
CDD | cd10017 | 3.05E-16 | 40 | 136 | No hit | No description |
SuperFamily | SSF101936 | 1.0E-16 | 40 | 137 | IPR015300 | DNA-binding pseudobarrel domain |
Pfam | PF02362 | 1.7E-11 | 42 | 133 | IPR003340 | B3 DNA binding domain |
PROSITE profile | PS50863 | 11.843 | 42 | 138 | IPR003340 | B3 DNA binding domain |
SMART | SM01019 | 1.2E-7 | 42 | 138 | IPR003340 | B3 DNA binding domain |
Gene Ontology ? help Back to Top | ||||||
---|---|---|---|---|---|---|
GO Term | GO Category | GO Description | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 161 aa Download sequence Send to blast |
MADVSGNNSI LLKEKASLER FGSTSESPQV EEDSYLQGGP FFDVVLTEAQ LQRSSALMLP 60 GHIAELLPRA TVPVTLTYNG KEWNSSYRGE SSRHPRFDSR WKVFARDNDL KCGDACVFEL 120 LENSKENLRF KVIILRCDLP PELVEMVDSR GKSFDSPIFL E |
Cis-element ? help Back to Top | |
---|---|
Source | Link |
PlantRegMap | KZV21793.1 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-value | Description | ||||
Refseq | XP_012831373.1 | 2e-45 | PREDICTED: B3 domain-containing protein Os04g0386900-like | ||||
TrEMBL | A0A2Z7AJA2 | 1e-115 | A0A2Z7AJA2_9LAMI; Uncharacterized protein | ||||
STRING | Migut.N01674.1.p | 8e-45 | (Erythranthe guttata) |
Orthologous Group ? help Back to Top | |||
---|---|---|---|
Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA1819 | 21 | 54 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT4G31680.1 | 3e-06 | B3 family protein |