PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID KZV21565.1
Organism
Dorcoceras hygrometricum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Gesneriaceae; Didymocarpoideae; Trichosporeae; Loxocarpinae; Dorcoceras
Family ERF
Protein Properties Length: 255aa    MW: 28636.6 Da    PI: 4.7413
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
KZV21565.1genomeCNUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP260.93e-1967115355
         AP2   3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                 y+G+r+++ +g+W+AeIrdps+     r++lg++ taeeAa+a+++ ++k++g
  KZV21565.1  67 YRGIRQRP-WGKWAAEIRDPSK---GVRVWLGTYNTAEEAARAYDREARKIRG 115
                 9*******.**********965...4************************998 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5103223.57866123IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.104.3E-3266125IPR001471AP2/ERF domain
SuperFamilySSF541711.83E-2266124IPR016177DNA-binding domain
SMARTSM003806.0E-3866129IPR001471AP2/ERF domain
CDDcd000182.18E-3267124No hitNo description
PfamPF008474.1E-1267115IPR001471AP2/ERF domain
PRINTSPR003671.3E-116778IPR001471AP2/ERF domain
PRINTSPR003671.3E-1189105IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0034059Biological Processresponse to anoxia
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 255 aa     Download sequence    Send to blast
MCGGAILAGI IPRRRDSAVG SCPTSADFWS VSFTQDASSS LKRSKPTRGD EHEEKFVVTK  60
KQRKNLYRGI RQRPWGKWAA EIRDPSKGVR VWLGTYNTAE EAARAYDREA RKIRGKKAKV  120
NFPNEYKEAY NPGPDYKQFY CQPFDDLDSE ELERCENEFY FKNHSEDEVS SEVNGNGGSN  180
KPEVVEVAAT VGAAEENELQ KLSEELTAYE DYMNFYQLPY VDGQSVTAAA TIPPPETVEL  240
WSFDEGSTVP ASSAL
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1gcc_A1e-2167123360ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 1
2gcc_A1e-2167123663ATERF1
3gcc_A1e-2167123663ATERF1
5wx9_A3e-21671261575Ethylene-responsive transcription factor ERF096
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapKZV21565.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011079624.11e-98ethylene-responsive transcription factor ERF071
TrEMBLA0A2Z7AIC10.0A0A2Z7AIC1_9LAMI; Ethylene response factor 2
STRINGMigut.D00130.1.p2e-74(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA71182329
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G47520.19e-38ERF family protein