PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | KZV21150.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Gesneriaceae; Didymocarpoideae; Trichosporeae; Loxocarpinae; Dorcoceras
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Family | MYB | ||||||||
Protein Properties | Length: 324aa MW: 36511.9 Da PI: 4.7338 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 54 | 3.9e-17 | 14 | 61 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+eEde+l+ ++k+ G g+W++ ++ g+ R++k+c++rw +yl KZV21150.1 14 KGKWTAEEDEKLITYIKENGQGSWRSLPKNAGLLRCGKSCRLRWMNYL 61 79******************************99************97 PP | |||||||
2 | Myb_DNA-binding | 57.5 | 3e-18 | 67 | 112 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+++++E+e +v+++k lG++ W++Ia++++ gRt++++k++w+++l KZV21150.1 67 RGNFSAQEEETIVKLHKTLGNK-WSLIASHLP-GRTDNEIKNYWNSHL 112 89********************.*********.************986 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:1.10.10.60 | 8.1E-22 | 6 | 64 | IPR009057 | Homeodomain-like |
PROSITE profile | PS51294 | 16.5 | 9 | 61 | IPR017930 | Myb domain |
SuperFamily | SSF46689 | 7.34E-29 | 11 | 108 | IPR009057 | Homeodomain-like |
SMART | SM00717 | 5.1E-13 | 13 | 63 | IPR001005 | SANT/Myb domain |
Pfam | PF00249 | 7.8E-16 | 14 | 61 | IPR001005 | SANT/Myb domain |
CDD | cd00167 | 3.36E-10 | 16 | 61 | No hit | No description |
PROSITE profile | PS51294 | 25.202 | 62 | 116 | IPR017930 | Myb domain |
Gene3D | G3DSA:1.10.10.60 | 3.3E-26 | 65 | 116 | IPR009057 | Homeodomain-like |
SMART | SM00717 | 4.3E-17 | 66 | 114 | IPR001005 | SANT/Myb domain |
Pfam | PF00249 | 2.6E-16 | 67 | 112 | IPR001005 | SANT/Myb domain |
CDD | cd00167 | 3.00E-11 | 69 | 112 | No hit | No description |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0051555 | Biological Process | flavonol biosynthetic process | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 324 aa Download sequence Send to blast |
MGRTLCCEKT GLNKGKWTAE EDEKLITYIK ENGQGSWRSL PKNAGLLRCG KSCRLRWMNY 60 LRDDVKRGNF SAQEEETIVK LHKTLGNKWS LIASHLPGRT DNEIKNYWNS HLSRRIYRYR 120 SIGALTEADL IELMVRVNKR RATGVARGVP KKFPAVEKHA NMEMAGSDSP TGGANVGSTG 180 TAEDEDWCPR DPFENDEMRG VNTSTASLYG TSELFVSPNE VMEGEDFGLW DGLDDGVLMH 240 VELISEGCGV GDKSEDEDMM IIDKDLKGKG TVNEKECGDW WLDIENMGFH ACFSPTIPYY 300 NDEGIRWEAN SGGEEFNLWN LEMN |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
1h8a_C | 1e-25 | 12 | 116 | 25 | 128 | MYB TRANSFORMING PROTEIN |
Search in ModeBase |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Transcription factor postulated to regulate the biosynthetic pathway of a flavonoid-derived pigment in certain floral tissues. |
Binding Motif ? help Back to Top | |||
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Motif ID | Method | Source | Motif file |
MP00627 | PBM | Transfer from PK06182.1 | Download |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | KZV21150.1 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | Retrieve |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_011071652.1 | 4e-96 | transcription factor MYB14 | ||||
Swissprot | P27898 | 5e-65 | MYBP_MAIZE; Myb-related protein P | ||||
TrEMBL | A0A2Z7AJ33 | 0.0 | A0A2Z7AJ33_9LAMI; Uncharacterized protein |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA12 | 24 | 2154 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G49330.1 | 3e-64 | myb domain protein 111 |