PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

KZV20231.1

Organism

Dorcoceras hygrometricum

Taxonomic ID

472368

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Gesneriaceae; Didymocarpoideae; Trichosporeae; Loxocarpinae; Dorcoceras

Family

Nin-like

Protein Properties

Length: 792aa MW: 88469.5 Da PI: 6.4103

Description

Nin-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
KZV20231.1	genome	CNU	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	RWP-RK	90.4	1.4e-28	514	564	2	52
RWP-RK 2 ekeisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkiksl 52 ek++sl++l++yF++++kdAAk++gvc+T+LKriCRq+GI RWP+Rkik++ KZV20231.1 514 EKTVSLDVLRQYFAGSLKDAAKNIGVCPTTLKRICRQHGITRWPSRKIKKV 564 799**********************************************97 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
PROSITE profile	PS51519	17.063	503	584	IPR003035	RWP-RK domain
Pfam	PF02042	1.2E-24	516	564	IPR003035	RWP-RK domain
Pfam	PF00564	1.7E-17	707	789	IPR000270	PB1 domain
Gene3D	G3DSA:3.10.20.240	4.4E-22	707	789	No hit	No description
PROSITE profile	PS51745	24.692	707	790	IPR000270	PB1 domain
SMART	SM00666	7.7E-25	707	790	IPR000270	PB1 domain
SuperFamily	SSF54277	2.01E-21	708	788	No hit	No description
CDD	cd06407	2.73E-34	709	788	No hit	No description

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0005515	Molecular Function	protein binding

Sequence ? help Back to Top
Protein Sequence Length: 792 aa Download sequence Send to blast
MEDSDDSTVD FDMMDQIFYD GFWVETETCD GSNLWQPISN HHLTSPPLEE NLGNSITNST 60 RQDTDFLKES TGEPNFFGES SFNHLPQMEE DLSASGQALN HVSTALNHHS NVLAGPDRNN 120 SVKKRFDQAI ERLKDCVRER AVLIQIWIPI KKEGRQVLIT NNSSFSLDPN CKNLSEYRDV 180 SEKYMFSADG EAGGFFGLPG RVFLKKLPEW TPDVRFFKQE EYPRVNHAYH YDVRGSLAFP 240 VFEPGSGRCL GVVEIVTMTQ KVNYLPELEN ICKALQGSNE SYQSTLIEIR NALKYVCTIH 300 SLPLAQTWAP CTEQGRQGCC LSQGNLAHCV STIDSACYVA DPQVSGFHEA CSEHHLLKGE 360 GVTGKAFLTN QPCFSEDVRA FSKADYPLSH YARMFDLSAA VAIRVRSTHL GTADFVLEFF 420 FPINCKAGED QQVMLESVLS VVQQNCQSLR VLSDEDLVQE TPSKEIVSTS AGGSQEKKGL 480 SEPKESATGG RNFTPSGNLS FGAKTSEKKQ IKNEKTVSLD VLRQYFAGSL KDAAKNIGVC 540 PTTLKRICRQ HGITRWPSRK IKKVGHSLKK LQLVMDSVQG ADGSMKLTSF YNNFPEFISP 600 PNVPVQRPLS MSNVTSHLQQ VNTQPEGCHL IPATTASMPA SSPGSHNSSS RHCFSLKRAT 660 SDAKLLDLGQ EKTKLLLRSN SQNIFINNHA TVESPPPNLS NENEMVTYKV KAYFGEEKIR 720 FSLHHQSSFQ DLKQEVFRRF DVNNNIKVDI KYLDDDAEWV LLTCDADLDE CMDIHRSSEI 780 RTIKISVFSK GS

Sequence ? help Back to Top

Protein Sequence Length: 792 aa Download sequence Send to blast

MEDSDDSTVD FDMMDQIFYD GFWVETETCD GSNLWQPISN HHLTSPPLEE NLGNSITNST  60
RQDTDFLKES TGEPNFFGES SFNHLPQMEE DLSASGQALN HVSTALNHHS NVLAGPDRNN  120
SVKKRFDQAI ERLKDCVRER AVLIQIWIPI KKEGRQVLIT NNSSFSLDPN CKNLSEYRDV  180
SEKYMFSADG EAGGFFGLPG RVFLKKLPEW TPDVRFFKQE EYPRVNHAYH YDVRGSLAFP  240
VFEPGSGRCL GVVEIVTMTQ KVNYLPELEN ICKALQGSNE SYQSTLIEIR NALKYVCTIH  300
SLPLAQTWAP CTEQGRQGCC LSQGNLAHCV STIDSACYVA DPQVSGFHEA CSEHHLLKGE  360
GVTGKAFLTN QPCFSEDVRA FSKADYPLSH YARMFDLSAA VAIRVRSTHL GTADFVLEFF  420
FPINCKAGED QQVMLESVLS VVQQNCQSLR VLSDEDLVQE TPSKEIVSTS AGGSQEKKGL  480
SEPKESATGG RNFTPSGNLS FGAKTSEKKQ IKNEKTVSLD VLRQYFAGSL KDAAKNIGVC  540
PTTLKRICRQ HGITRWPSRK IKKVGHSLKK LQLVMDSVQG ADGSMKLTSF YNNFPEFISP  600
PNVPVQRPLS MSNVTSHLQQ VNTQPEGCHL IPATTASMPA SSPGSHNSSS RHCFSLKRAT  660
SDAKLLDLGQ EKTKLLLRSN SQNIFINNHA TVESPPPNLS NENEMVTYKV KAYFGEEKIR  720
FSLHHQSSFQ DLKQEVFRRF DVNNNIKVDI KYLDDDAEWV LLTCDADLDE CMDIHRSSEI  780
RTIKISVFSK GS

Cis-element ? help Back to Top
Source	Link
PlantRegMap	KZV20231.1

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_022873314.1	0.0	protein NLP2-like isoform X1
Refseq	XP_022873316.1	0.0	protein NLP2-like isoform X1
Refseq	XP_022873317.1	0.0	protein NLP2-like isoform X1
TrEMBL	A0A2Z7AM04	0.0	A0A2Z7AM04_9LAMI; Uncharacterized protein
STRING	XP_009623517.1	0.0	(Nicotiana tomentosiformis)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Asterids	OGEA1598	24	67

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G35270.1	0.0	Nin-like family protein