PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | KZV18704.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Gesneriaceae; Didymocarpoideae; Trichosporeae; Loxocarpinae; Dorcoceras
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Family | ERF | ||||||||
Protein Properties | Length: 299aa MW: 33408.4 Da PI: 6.5137 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 60.8 | 3.1e-19 | 24 | 74 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpseng.krkrfslgkfgtaeeAakaaiaarkkleg 55 +++ GVr+++ +grWvAeI+d ++ r +lg+f+tae+Aa+a+++a+++l+g KZV18704.1 24 PKFVGVRQRP-SGRWVAEIKD----SlQKVRLWLGTFDTAEDAARAYDNAARQLRG 74 799*******.7*********....4456*************************98 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
CDD | cd00018 | 9.12E-32 | 24 | 82 | No hit | No description |
Pfam | PF00847 | 3.6E-13 | 24 | 74 | IPR001471 | AP2/ERF domain |
SuperFamily | SSF54171 | 2.75E-20 | 25 | 83 | IPR016177 | DNA-binding domain |
PROSITE profile | PS51032 | 20.547 | 25 | 82 | IPR001471 | AP2/ERF domain |
Gene3D | G3DSA:3.30.730.10 | 5.3E-29 | 25 | 82 | IPR001471 | AP2/ERF domain |
SMART | SM00380 | 4.1E-37 | 25 | 88 | IPR001471 | AP2/ERF domain |
PRINTS | PR00367 | 8.7E-8 | 26 | 37 | IPR001471 | AP2/ERF domain |
PRINTS | PR00367 | 8.7E-8 | 48 | 64 | IPR001471 | AP2/ERF domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 299 aa Download sequence Send to blast |
MKQTRNTDED GSRVRKKTSS RGHPKFVGVR QRPSGRWVAE IKDSLQKVRL WLGTFDTAED 60 AARAYDNAAR QLRGTSARTN FELPNPNASQ VMLENIEPFS FDAMCWTEEP DGLVGALKAK 120 LLNKRSARTQ AKISSLSNRW FDLEPCSLPN NAIERTTTSF IVTTPAMNST QICDRSTHVD 180 RIDEVPNPLI GYKDENSSLV WQKREQKLPS LPQINHVRQD ELLVDSTKEC AWPTVELSYN 240 FNPLSEVLSQ SNKIGDDALL NASSPWNPTL HGDYECHGLV GSNAASDSDL HCLLPSILG |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
5wx9_A | 1e-15 | 23 | 81 | 12 | 71 | Ethylene-responsive transcription factor ERF096 |
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Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | KZV18704.1 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_022860797.1 | 2e-77 | ethylene-responsive transcription factor RAP2-12-like | ||||
TrEMBL | A0A2Z7AHF5 | 0.0 | A0A2Z7AHF5_9LAMI; Uncharacterized protein |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA11869 | 18 | 19 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G19790.1 | 2e-20 | related to AP2 11 |