PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | KZV17664.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Gesneriaceae; Didymocarpoideae; Trichosporeae; Loxocarpinae; Dorcoceras
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Family | NAC | ||||||||
Protein Properties | Length: 331aa MW: 37099.9 Da PI: 8.1387 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 167.8 | 3.7e-52 | 11 | 137 | 1 | 129 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkgel 99 lppGfrFhP+deelv++yL + v+g + ++ + +vd++k+ePwd+p ++ + kewyf+s+rd+kyatg r+nrat sgyWkatgkd++v++ kg++ KZV17664.1 11 LPPGFRFHPKDEELVCNYLMNWVAGCTQNT-PLLIQVDLNKCEPWDIPDTACVGGKEWYFYSQRDRKYATGLRTNRATVSGYWKATGKDRPVVR-KGTQ 107 79************************9888.67999************7666789**************************************9.9999 PP NAM 100 vglkktLvfykgrapkgektdWvmheyrle 129 vg++ktLvfy+grapkg+ktdWvmhe+rle KZV17664.1 108 VGMRKTLVFYQGRAPKGRKTDWVMHEFRLE 137 ***************************985 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF101941 | 8.89E-60 | 4 | 163 | IPR003441 | NAC domain |
PROSITE profile | PS51005 | 55.444 | 11 | 163 | IPR003441 | NAC domain |
Pfam | PF02365 | 1.6E-26 | 12 | 136 | IPR003441 | NAC domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 331 aa Download sequence Send to blast |
MISLSTLEAK LPPGFRFHPK DEELVCNYLM NWVAGCTQNT PLLIQVDLNK CEPWDIPDTA 60 CVGGKEWYFY SQRDRKYATG LRTNRATVSG YWKATGKDRP VVRKGTQVGM RKTLVFYQGR 120 APKGRKTDWV MHEFRLEGAP GRGLKQAHSN KDEDWVLCRM FYKSRSETPN KPENSNAAAS 180 INGHNLIPNA ASSSLSLPPL MEPCNNFFDH THPYPQQVPC FSNIINAQTN PNSSLFNHQE 240 YSSTKLMIPG LGQTVSYPVI RNPPLWDCAV TYPYSTSCDE KVIKDVLSYL TKTESVNDDK 300 HTAAIVGSPS FGEGSSESYL SEAGLSSLWN Q |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
3ulx_A | 3e-52 | 8 | 164 | 12 | 169 | Stress-induced transcription factor NAC1 |
Search in ModeBase |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Transcriptional activator that mediates auxin signaling to promote lateral root development. Activates the expression of two downstream auxin-responsive genes, DBP and AIR3. {ECO:0000269|PubMed:11114891}. |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | KZV17664.1 |
Regulation -- Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | INDUCTION: Induced by auxin. |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_011095676.1 | 1e-127 | NAC domain-containing protein 21/22-like | ||||
Swissprot | Q84TE6 | 6e-98 | NAC22_ARATH; NAC domain-containing protein 21/22 | ||||
TrEMBL | A0A2Z7AFC5 | 0.0 | A0A2Z7AFC5_9LAMI; NAC domain-containing protein 21/22 isoform 1 | ||||
STRING | Migut.M01566.1.p | 1e-117 | (Erythranthe guttata) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA134 | 24 | 297 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G56010.2 | 3e-88 | NAC domain containing protein 1 |