PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID KZV17168.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Gesneriaceae; Didymocarpoideae; Trichosporeae; Loxocarpinae; Dorcoceras
Family MYB
Protein Properties Length: 292aa    MW: 33341.4 Da    PI: 7.0262
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
KZV17168.1genomeCNUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding24.46.7e-082569345
                     SS-HHHHHHHHHHHHHTTTT...-HHHHHHHHTTTS-HHHHHHHHH CS
  Myb_DNA-binding  3 rWTteEdellvdavkqlGgg...tWktIartmgkgRtlkqcksrwq 45
                     +WT+eE +++ +a + + ++   +W  +a++++ g+t  ++   + 
       KZV17168.1 25 KWTPEENKRFENALAFFDKDtpdRWYNVAAMIP-GKTVSDVMKQYK 69
                     8********************************.****99988876 PP

2Myb_DNA-binding46.21e-14132176347
                      SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding   3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                      +WT+eE+ +++ + k++G+g+W+ I+r + ++Rt+ q+ s+ qky
       KZV17168.1 132 PWTEEEHRQFLLGLKKYGKGDWRNISRNFVTTRTPTQVASHAQKY 176
                      8*******************************************9 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS512938.2032176IPR017884SANT domain
SMARTSM007171.5E-72274IPR001005SANT/Myb domain
SuperFamilySSF466896.39E-122579IPR009057Homeodomain-like
PfamPF002492.2E-62570IPR001005SANT/Myb domain
CDDcd001671.52E-62572No hitNo description
PROSITE profilePS5129421.067125181IPR017930Myb domain
SuperFamilySSF466892.0E-17127180IPR009057Homeodomain-like
TIGRFAMsTIGR015578.4E-18128180IPR006447Myb domain, plants
Gene3DG3DSA:1.10.10.601.6E-12129176IPR009057Homeodomain-like
SMARTSM007173.5E-13129179IPR001005SANT/Myb domain
PfamPF002493.8E-12132176IPR001005SANT/Myb domain
CDDcd001676.41E-11132177No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 292 aa     Download sequence    Send to blast
MDRETVQPWV RTSDWLFEEN KVITKWTPEE NKRFENALAF FDKDTPDRWY NVAAMIPGKT  60
VSDVMKQYKE LVEDVSDIEA GLIPIPGYAN NTFTLEWVSS HPCQGLKPLY NPGGKRVSSI  120
RGSDHERKKG VPWTEEEHRQ FLLGLKKYGK GDWRNISRNF VTTRTPTQVA SHAQKYFIRQ  180
VSGGKDKRRS SIHDITTVNL TETETSSRDK DLNRPDSPHT SALIMKSQQN LDEITGFVPE  240
MYESNVLQDP CSMMGFAPGN SSLIITHFPG NPSFGFDLYN GAIFQVQHAQ QH
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2cjj_A7e-1826881173RADIALIS
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtInvolved in the dorsovental asymmetry of flowers. Promotes ventral identity. {ECO:0000269|PubMed:11937495, ECO:0000269|PubMed:9118809}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapKZV17168.1
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011094978.11e-140transcription factor DIVARICATA-like
SwissprotQ8S9H74e-97DIV_ANTMA; Transcription factor DIVARICATA
TrEMBLA0A2Z7A6D10.0A0A2Z7A6D1_9LAMI; Transcription factor DIVARICATA-like
STRINGXP_006480971.11e-114(Citrus sinensis)
STRINGXP_006429310.11e-114(Citrus clementina)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA45824140
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G38090.11e-105MYB family protein
Publications ? help Back to Top
  1. Galego L,Almeida J
    Role of DIVARICATA in the control of dorsoventral asymmetry in Antirrhinum flowers.
    Genes Dev., 2002. 16(7): p. 880-91
    [PMID:11937495]
  2. Almeida J,Rocheta M,Galego L
    Genetic control of flower shape in Antirrhinum majus.
    Development, 1997. 124(7): p. 1387-92
    [PMID:9118809]