PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID KZV16335.1
Organism
Dorcoceras hygrometricum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Gesneriaceae; Didymocarpoideae; Trichosporeae; Loxocarpinae; Dorcoceras
Family ERF
Protein Properties Length: 143aa    MW: 15879.3 Da    PI: 4.7864
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
KZV16335.1genomeCNUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP2621.3e-192071256
         AP2  2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56
                +y+GVr ++ +g+++AeIrd s++g  +r++lg+f++a+eAa+a+++a+ +++g+
  KZV16335.1 20 KYRGVRKRP-WGKYAAEIRDSSKQG--ARVWLGTFDSAKEAARAYDRAAYSMRGH 71
                8********.**********65544..**************************97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000181.14E-172079No hitNo description
PfamPF008472.1E-142071IPR001471AP2/ERF domain
SuperFamilySSF541711.11E-222079IPR016177DNA-binding domain
Gene3DG3DSA:3.30.730.106.1E-312080IPR001471AP2/ERF domain
PROSITE profilePS5103223.0242078IPR001471AP2/ERF domain
SMARTSM003802.1E-342084IPR001471AP2/ERF domain
PRINTSPR003676.0E-112132IPR001471AP2/ERF domain
PRINTSPR003676.0E-114460IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 143 aa     Download sequence    Send to blast
MSEGPSNYEG KSGGDAGEIK YRGVRKRPWG KYAAEIRDSS KQGARVWLGT FDSAKEAARA  60
YDRAAYSMRG HLAILNFPEE YNMPASSSHF LPGTGPGSGS GSGLHGQEDE NARQVFEFEY  120
YDDKLLEDLL DCDEREEKGK KED
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5wx9_A1e-3791423131Ethylene-responsive transcription factor ERF096
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtProbably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). {ECO:0000250}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapKZV16335.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_022854872.15e-51ethylene-responsive transcription factor ERF095-like
SwissprotQ9LTC53e-41ERF98_ARATH; Ethylene-responsive transcription factor ERF098
TrEMBLA0A2Z7ABK61e-100A0A2Z7ABK6_9LAMI; Uncharacterized protein
STRINGSolyc03g005500.1.11e-49(Solanum lycopersicum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA21241165
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G43410.16e-28ERF family protein
Publications ? help Back to Top
  1. Van den Broeck L, et al.
    From network to phenotype: the dynamic wiring of an Arabidopsis transcriptional network induced by osmotic stress.
    Mol. Syst. Biol., 2017. 13(12): p. 961
    [PMID:29269383]