PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID KZV15980.1
Organism
Dorcoceras hygrometricum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Gesneriaceae; Didymocarpoideae; Trichosporeae; Loxocarpinae; Dorcoceras
Family NAC
Protein Properties Length: 340aa    MW: 38905.7 Da    PI: 7.9062
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
KZV15980.1genomeCNUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM55.81.6e-1717623754116
         NAM  54 eekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkgelvglkktLvfykgrapkg 116
                  ++ewyfF++r+ ky++g+r+nra+ +gyWkat  d+++ + ++e++g kktLv+ +gr p+ 
  KZV15980.1 176 ARDEWYFFTSRELKYPNGSRPNRAAGDGYWKATVADQRIQQ-RQEVIGFKKTLVLTTGRPPTE 237
                 4569************************************9.999************999875 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5100514.681129273IPR003441NAC domain
PfamPF023651.1E-6146231IPR003441NAC domain
SuperFamilySSF1019411.44E-17175238IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 340 aa     Download sequence    Send to blast
MVLNASLLML PCRHDDLLDD YHILKNWEYD VWINSPQSVT ERRRKFIRFS SGHSSASIWS  60
CNDLDSSVDV DLVDVKSDNG SESLVEKEVF VSCSEQRATD KLKDRLLNRL RSISCMACGA  120
INDDNVQSNN DSRVEETRIH RVKVQYFRRR MKKLSGLFTG EDSGKFLHEN MYPTLARDEW  180
YFFTSRELKY PNGSRPNRAA GDGYWKATVA DQRIQQRQEV IGFKKTLVLT TGRPPTERRR  240
IGSCTSTPFD RDPLVMMPTT TCSQTTACCV GYERKRTAVI QPNLPTQNVE VPQTNQARPQ  300
QIGLAIQPNL GGQFENPMNC VPHSQQNHFE NQESSLEPFS
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
3ulx_A6e-1817923570126Stress-induced transcription factor NAC1
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
14045ERRRKF
Cis-element ? help Back to Top
SourceLink
PlantRegMapKZV15980.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLA0A2Z7AAJ70.0A0A2Z7AAJ7_9LAMI; Uncharacterized protein
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G77450.17e-19NAC domain containing protein 32