PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID KZV15950.1
Organism
Dorcoceras hygrometricum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Gesneriaceae; Didymocarpoideae; Trichosporeae; Loxocarpinae; Dorcoceras
Family MYB
Protein Properties Length: 366aa    MW: 40424.9 Da    PI: 8.1311
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
KZV15950.1genomeCNUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding55.71.1e-171461148
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                     +g+WT+eEd++l+ ++ q+G g+W++ + + g+ R++k+c++rw +yl
       KZV15950.1 14 KGPWTPEEDQKLLAYIDQHGHGSWRALPTKAGLQRCGKSCRLRWTNYL 61
                     79********************************************97 PP
2Myb_DNA-binding51.91.8e-1667112148
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 
                      rg+++ +E++ +++++++lG++ W++Ia +++ +Rt++++k++w+++l
       KZV15950.1  67 RGKFSLQEEQSIIQLHALLGNR-WSAIATHLP-KRTDNEIKNYWNTHL 112
                      89********************.*********.************996 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.10.10.601.7E-25564IPR009057Homeodomain-like
PROSITE profilePS5129417.915961IPR017930Myb domain
SuperFamilySSF466895.99E-3011108IPR009057Homeodomain-like
SMARTSM007172.8E-131363IPR001005SANT/Myb domain
PfamPF002496.3E-161461IPR001005SANT/Myb domain
CDDcd001677.75E-111661No hitNo description
PROSITE profilePS5129425.26562116IPR017930Myb domain
Gene3DG3DSA:1.10.10.605.7E-2665117IPR009057Homeodomain-like
SMARTSM007175.3E-1666114IPR001005SANT/Myb domain
PfamPF002491.0E-1567112IPR001005SANT/Myb domain
CDDcd001672.15E-1169112No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0000902Biological Processcell morphogenesis
GO:0009651Biological Processresponse to salt stress
GO:0009723Biological Processresponse to ethylene
GO:0009733Biological Processresponse to auxin
GO:0009739Biological Processresponse to gibberellin
GO:0009751Biological Processresponse to salicylic acid
GO:0009753Biological Processresponse to jasmonic acid
GO:0046686Biological Processresponse to cadmium ion
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 366 aa     Download sequence    Send to blast
MGRSPCCDKV GLKKGPWTPE EDQKLLAYID QHGHGSWRAL PTKAGLQRCG KSCRLRWTNY  60
LRPDIKRGKF SLQEEQSIIQ LHALLGNRWS AIATHLPKRT DNEIKNYWNT HLKKRLVKMG  120
IDPVTHKTKN DALLSSDSQS KNAANLSHMA QWESARLEAE ARLTRQSKLR SGTGISFQAR  180
NSEFASTSSQ NQNPVGSVRC LDVLKAWKGD FRGKASEVGG ASGGSSTTGI VGELESPTST  240
LSSSAGTGQS SAAFIESLRN CSESYYSGIV KAETGEEWKF LQEQTNAAEN QAHQFPPFPE  300
TDNSADQVPR GSFVENFTNL LLSASSDRPF FDDGGESELN GGGDYFEENK NYWNSILYLV  360
NSSPMF
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1a5j_A5e-26121165108B-MYB
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtFunctions as a repressor of epidermal cell outgrowth and negatively regulate trichome branch formation (PubMed:18805951, PubMed:21070410). Acts as both a positive and negative regulator of cellular outgrowth. Promotes both trichome expansion and branch formation (PubMed:21070410). Coordinately with WIN1/SHN1, participates in the regulation of cuticle biosynthesis and wax accumulation in reproductive organs and trichomes. Functions in cuticle nanoridge formation in petals and stamens, and in morphogenesis of petal conical cells and trichomes (PubMed:23709630). May play a role in the regulation of cuticle formation in vegetative organs (PubMed:24169067). {ECO:0000269|PubMed:18805951, ECO:0000269|PubMed:21070410, ECO:0000269|PubMed:23709630, ECO:0000269|PubMed:24169067}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapKZV15950.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011098652.10.0myb-related protein 306
SwissprotQ9LE631e-116MY106_ARATH; Transcription factor MYB106
TrEMBLA0A2Z7AAH00.0A0A2Z7AAH0_9LAMI; Myb-related protein 306-like
STRINGMigut.H00943.1.p1e-168(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA12242154
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G15310.11e-109myb domain protein 16