PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID KZV15660.1
Organism
Dorcoceras hygrometricum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Gesneriaceae; Didymocarpoideae; Trichosporeae; Loxocarpinae; Dorcoceras
Family bHLH
Protein Properties Length: 266aa    MW: 30163 Da    PI: 7.8541
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
KZV15660.1genomeCNUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH39.78.9e-135094554
                HHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
         HLH  5 hnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54
                + + Er+RR+++N+++  Lr+++P+      +K++Ka+i + A+eYI+ L
  KZV15660.1 50 NIASERNRRKKLNERLYALRSVVPNI-----TKMDKASIIKDAIEYIRTL 94
                5578*********************7.....7****************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088816.6284594IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000835.85E-134899No hitNo description
SuperFamilySSF474593.53E-1849115IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000101.8E-105094IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003534.3E-1551100IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.105.4E-1751110IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 266 aa     Download sequence    Send to blast
MEQFDDANKH YWENMYLQNE ELESYFDEVL SAYYDSSSPD GIQSSLASKN IASERNRRKK  60
LNERLYALRS VVPNITKMDK ASIIKDAIEY IRTLHEEERI LQAEISELEN GKPSNSPMCD  120
FDQEFCSRAK RTRIDHGSRC NSSPLEVLEL RVSSMGEKTV VVSLTCNQRT DTIVKLCEMF  180
ESLKLKIITA NITAFSGRLL KTVFIEASRR LAPTSFTGKP ALQKVGGGRS SNQRGGRNKS  240
GEEAAARGFG REERRWVAVL ELGFNE
Cis-element ? help Back to Top
SourceLink
PlantRegMapKZV15660.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011094110.11e-104transcription factor bHLH35
SwissprotQ2HIV95e-73BH035_ARATH; Transcription factor bHLH35
TrEMBLA0A2Z7A9N20.0A0A2Z7A9N2_9LAMI; Uncharacterized protein
STRINGGLYMA09G06770.15e-96(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA29232451
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G57150.11e-75bHLH family protein