PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID KZV15484.1
Organism
Dorcoceras hygrometricum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Gesneriaceae; Didymocarpoideae; Trichosporeae; Loxocarpinae; Dorcoceras
Family bZIP
Protein Properties Length: 418aa    MW: 46135.7 Da    PI: 7.8548
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
KZV15484.1genomeCNUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_135.32.5e-11266325463
                 XCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
      bZIP_1   4 lkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 
                  kr++r   NR +A rs +RK+ +i eLe kv++L++e ++L  +   l+k +++l++++
  KZV15484.1 266 PKRAKRILANRQSAARSKERKLRYISELELKVQTLQTEATTLSAQFTILQKDYSELTNQN 325
                 59******************************************************9998 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003386.8E-16263327IPR004827Basic-leucine zipper domain
PROSITE profilePS5021710.691265328IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1703.4E-10267324No hitNo description
SuperFamilySSF579596.83E-11267319No hitNo description
PfamPF001704.0E-10267325IPR004827Basic-leucine zipper domain
CDDcd147031.95E-21268317No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 418 aa     Download sequence    Send to blast
MKDVSMDETD VSSRGPPVAP SFGREHLFRG TDSLPPRRGH RRSNSDVPLE FSAMIQSSPQ  60
LLPISGQGMF GRTTSMRENL GNGKPIGLKR QDMDILGHGK IDADGIGDRK SDGEVVDDLF  120
NSLINLDHVN AMNASGVELK YKDCIVSGTK LSGDDGSNTE LEIVSKHGTN MREGVKRTAA  180
GDIAPPARHY RSLSMDSAIG NFQFGEESPK LQSSLFNRVD QLSPSNSASD NSVKLNIEFG  240
HGEFNEVELK KIVADERLSE IAASDPKRAK RILANRQSAA RSKERKLRYI SELELKVQTL  300
QTEATTLSAQ FTILQKDYSE LTNQNNELKF RLKAMEQQAQ LRDALHEALT AEVQRLKLAK  360
MELREDGRTS NGITQQTPVK HQMWQLQPQP NQQPNQIQRL SVPTSATSTT ASTAPTSA
Cis-element ? help Back to Top
SourceLink
PlantRegMapKZV15484.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011083495.10.0transcription factor VIP1 isoform X2
RefseqXP_011083496.10.0transcription factor VIP1 isoform X1
RefseqXP_020551039.10.0transcription factor VIP1 isoform X1
TrEMBLA0A2Z7A1T20.0A0A2Z7A1T2_9LAMI; Uncharacterized protein
STRINGXP_009610158.11e-172(Nicotiana tomentosiformis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA12652478
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G38900.32e-90bZIP family protein