PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

KZV14934.1

Organism

Dorcoceras hygrometricum

Taxonomic ID

472368

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Gesneriaceae; Didymocarpoideae; Trichosporeae; Loxocarpinae; Dorcoceras

Family

C2H2

Protein Properties

Length: 396aa MW: 42077.5 Da PI: 6.1347

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
KZV14934.1	genome	CNU	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	13.7	0.00019	191	213	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 y C++C++ F++k +L H++ H KZV14934.1 191 YGCKYCHRKFTNKQSLGGHQNAH 213 67******************988 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SuperFamily	SSF57667	1.19E-5	188	219	No hit	No description
PROSITE profile	PS50157	11.51	191	218	IPR007087	Zinc finger, C2H2
PROSITE pattern	PS00028	0	193	213	IPR007087	Zinc finger, C2H2

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0046872	Molecular Function	metal ion binding

Sequence ? help Back to Top
Protein Sequence Length: 396 aa Download sequence Send to blast
MESPNAVAGN KALFDVSSKS GQEMDHSLAV GGAMSVDSSN KSGNKMGLIS VVPGGSSTQG 60 ANGCDELNPE VNSLNSNKEI PPVLVGASRD SPKGVDLDES SLEVKSPKPK DGAPLHVLDS 120 IDESVKGEKL DESNFQVNSS HTRTGEIPPP LQDPSQDSVK EGNVDKSNVG VPPVEAEASE 180 VANACQDDGE YGCKYCHRKF TNKQSLGGHQ NAHKFERAME KDAASHEAHK SGAGLFSSSS 240 SYSRTTSPLS SKPGSLKRSH EYMNRPLQIN RPSQSQLLLQ PQDVPRNFHD VYRGYQPGWT 300 VPAPRISSSV PTAPVPRVSQ FVTAQPPYLP GVALTLQFQN PGPPSSSSRP VSLCLTAFPE 360 SRLVPGRNAG VHNNNQINVP GNEEGDDSGL DLSLKL

Sequence ? help Back to Top

Protein Sequence Length: 396 aa Download sequence Send to blast

MESPNAVAGN KALFDVSSKS GQEMDHSLAV GGAMSVDSSN KSGNKMGLIS VVPGGSSTQG  60
ANGCDELNPE VNSLNSNKEI PPVLVGASRD SPKGVDLDES SLEVKSPKPK DGAPLHVLDS  120
IDESVKGEKL DESNFQVNSS HTRTGEIPPP LQDPSQDSVK EGNVDKSNVG VPPVEAEASE  180
VANACQDDGE YGCKYCHRKF TNKQSLGGHQ NAHKFERAME KDAASHEAHK SGAGLFSSSS  240
SYSRTTSPLS SKPGSLKRSH EYMNRPLQIN RPSQSQLLLQ PQDVPRNFHD VYRGYQPGWT  300
VPAPRISSSV PTAPVPRVSQ FVTAQPPYLP GVALTLQFQN PGPPSSSSRP VSLCLTAFPE  360
SRLVPGRNAG VHNNNQINVP GNEEGDDSGL DLSLKL

Cis-element ? help Back to Top
Source	Link
PlantRegMap	KZV14934.1

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
TrEMBL	A0A2Z7A068	0.0	A0A2Z7A068_9LAMI; Zinc finger protein 8-like

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Asterids	OGEA13342	7	14

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G05120.1	1e-09	C2H2 family protein