PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID KZV14727.1
Organism
Dorcoceras hygrometricum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Gesneriaceae; Didymocarpoideae; Trichosporeae; Loxocarpinae; Dorcoceras
Family WRKY
Protein Properties Length: 362aa    MW: 40286.7 Da    PI: 6.1883
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
KZV14727.1genomeCNUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY1062e-33183241159
                 ---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
        WRKY   1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 
                 ldDgy+WrKYGqK vk+s+fprsYYrCt+++C vkk+vers+edp++v++tYeg+H h+
  KZV14727.1 183 LDDGYRWRKYGQKAVKNSPFPRSYYRCTTTSCGVKKRVERSSEDPSIVVTTYEGTHVHP 241
                 59********************************************************8 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.804.9E-34168243IPR003657WRKY domain
SuperFamilySSF1182903.79E-29175243IPR003657WRKY domain
PROSITE profilePS5081131.422178243IPR003657WRKY domain
SMARTSM007741.4E-38183242IPR003657WRKY domain
PfamPF031061.1E-26184241IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 362 aa     Download sequence    Send to blast
MEEKKEESEI KSDNSLQNAA FSDHQSAAMI SDASFYPPNS ALFDIPAVHH QKSSSLGFAD  60
FGSFQDFSNP SYMFDDLMML QSIAAAPSLI PLQQQLQPES SEVVNTPATP NSSSISSSST  120
EAAPANDDQK RAETVEEEDQ DQEQQQEQDR DKIKKQLKLK KKNQKRPREP RFAFMTKSEI  180
DHLDDGYRWR KYGQKAVKNS PFPRSYYRCT TTSCGVKKRV ERSSEDPSIV VTTYEGTHVH  240
PCPITPRGSF GILPETTTLG GVGGGGIGGT GAASSFITPR IFHHYRQQQQ QQHQTQPYFS  300
NLSPLTIPMS FTNSSSSTND SLPLAPLIRE RPFCPSSSSL ARDHGLLQDM VPSQMLKEPK  360
EE
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1wj2_A3e-271762431077Probable WRKY transcription factor 4
2lex_A3e-271762431077Probable WRKY transcription factor 4
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapKZV14727.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011100744.21e-102probable WRKY transcription factor 48, partial
TrEMBLA0A2Z6ZZU50.0A0A2Z6ZZU5_9LAMI; Putative WRKY transcription factor 48
STRINGMigut.N00035.1.p9e-93(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA13092479
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G49520.12e-47WRKY DNA-binding protein 48