PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | KZV14716.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Gesneriaceae; Didymocarpoideae; Trichosporeae; Loxocarpinae; Dorcoceras
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Family | HD-ZIP | ||||||||
Protein Properties | Length: 230aa MW: 26623.3 Da PI: 9.6329 | ||||||||
Description | HD-ZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 61.2 | 1.6e-19 | 95 | 149 | 2 | 56 |
T--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 2 rkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 rk+ +++k+q + Le+ F+++++++ ++++eLA+kl+L+ rqV vWFqNrRa+ k KZV14716.1 95 RKKLRLSKDQSTLLEDSFRQHSTLTMAQKQELAEKLNLKPRQVEVWFQNRRARTK 149 677889***********************************************98 PP | |||||||
2 | HD-ZIP_I/II | 112.6 | 2.5e-36 | 95 | 185 | 1 | 91 |
HD-ZIP_I/II 1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreel 91 +kk+rlsk+q++lLE+sF+++++L+ +K+ela++L+l+prqv+vWFqnrRARtk+kq+E d+e+Lk+++++l+een+rL+++ eLr++ KZV14716.1 95 RKKLRLSKDQSTLLEDSFRQHSTLTMAQKQELAEKLNLKPRQVEVWFQNRRARTKLKQTEIDCEFLKNKFERLSEENRRLHNQLLELRSAA 185 69*************************************************************************************9865 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS50071 | 17.151 | 91 | 151 | IPR001356 | Homeobox domain |
SMART | SM00389 | 2.4E-16 | 93 | 155 | IPR001356 | Homeobox domain |
SuperFamily | SSF46689 | 1.41E-18 | 94 | 161 | IPR009057 | Homeodomain-like |
Gene3D | G3DSA:1.10.10.60 | 2.0E-18 | 95 | 149 | IPR009057 | Homeodomain-like |
Pfam | PF00046 | 1.0E-16 | 95 | 149 | IPR001356 | Homeobox domain |
CDD | cd00086 | 3.03E-15 | 95 | 152 | No hit | No description |
PROSITE pattern | PS00027 | 0 | 126 | 149 | IPR017970 | Homeobox, conserved site |
Pfam | PF02183 | 2.4E-7 | 151 | 183 | IPR003106 | Leucine zipper, homeobox-associated |
SMART | SM00340 | 3.2E-10 | 151 | 194 | IPR003106 | Leucine zipper, homeobox-associated |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 230 aa Download sequence Send to blast |
MEETDVSSNM KLGLDLRLGL SKYEPKTDNS KKNKRVFFLD LSIPHHPSDL DHHARYSSSS 60 CVDIMQETMK QTRKKGIFSG GCKEDDDMNY SNCCRKKLRL SKDQSTLLED SFRQHSTLTM 120 AQKQELAEKL NLKPRQVEVW FQNRRARTKL KQTEIDCEFL KNKFERLSEE NRRLHNQLLE 180 LRSAAKTEKI SPPPPHTSAA TTVPASVQRL FNQIPKESAI YRTCSSCEKT |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 143 | 151 | RRARTKLKQ |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Probable transcription factor. {ECO:0000250}. | |||||
UniProt | Probable transcription factor. {ECO:0000250}. |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | KZV14716.1 |
Regulation -- Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | INDUCTION: In leaves by drought stress. {ECO:0000269|PubMed:17999151}. | |||||
UniProt | INDUCTION: In leaves by drought stress. {ECO:0000269|PubMed:17999151}. |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_022871793.1 | 4e-66 | homeobox-leucine zipper protein HAT9-like | ||||
Swissprot | A2XE76 | 1e-44 | HOX19_ORYSI; Homeobox-leucine zipper protein HOX19 | ||||
Swissprot | Q8GRL4 | 1e-44 | HOX19_ORYSJ; Homeobox-leucine zipper protein HOX19 | ||||
TrEMBL | A0A2Z6ZZQ4 | 1e-170 | A0A2Z6ZZQ4_9LAMI; Uncharacterized protein | ||||
STRING | Migut.K00228.1.p | 4e-53 | (Erythranthe guttata) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA290 | 24 | 186 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G17460.1 | 4e-41 | Homeobox-leucine zipper protein 4 (HB-4) / HD-ZIP protein |