PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID KZV14686.1
Organism
Dorcoceras hygrometricum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Gesneriaceae; Didymocarpoideae; Trichosporeae; Loxocarpinae; Dorcoceras
Family HD-ZIP
Protein Properties Length: 843aa    MW: 92452.4 Da    PI: 6.3661
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
KZV14686.1genomeCNUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox58.41.2e-182179357
                --SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS
    Homeobox  3 kRttftkeqleeLeelFeknrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57
                k  ++t+eq+e+Le++++++++ps  +r++L +++    +++ +q+kvWFqNrR +ek+
  KZV14686.1 21 KYVRYTPEQVEALERVYAECPKPSSLRRQQLIRECpilsNIEPKQIKVWFQNRRCREKQ 79
                6789*****************************************************97 PP
2START166.51.8e-521683762205
                 HHHHHHHHHHHHHHHC-TT-EEEEEXCCTTEEEEEEESSS.SCEEEEEEEECCSCHHHHHHHHHCCCGGCT-TT-SEEEEEEEECTT..EEEEEEEEXX CS
       START   2 laeeaaqelvkkalaeepgWvkssesengdevlqkfeeskvdsgealrasgvvdmvlallveellddkeqWdetlakaetlevissg..galqlmvael 98 
                 +aee+++e++ ka+ ++  Wv++  +++g++++ +++ s+++sg a+ra+g+v  +++  v+ell+d++ W ++++ +++  vi +g  g+++l ++++
  KZV14686.1 168 IAEETLTEFLGKATGTAVDWVQMIGMKPGPDSIGIVAVSRNCSGVAARACGLVSLEAT-KVAELLKDRPSWYRDCRCIDIASVIPTGngGTIELVYMQT 265
                 6899******************************************************.9*************************************** PP

                 TTXX-SSX.EEEEEEEEEEE.TTS-EEEEEEEEE-TTS--....-TTSEE-EESSEEEEEEEECTCEEEEEEEE-EE--SSXXHHHHHHHHHHHHHHHH CS
       START  99 qalsplvp.RdfvfvRyirqlgagdwvivdvSvdseqkppe...sssvvRaellpSgiliepksnghskvtwvehvdlkgrlphwllrslvksglaega 193
                 +a+++l++ Rdf+++Ry+ +l++g +vi+++S++s++  p+      +vR+e+lpSg+li+p+++g++ +++v+hvdl+ +++++++r+l++s+ + ++
  KZV14686.1 266 YAPTTLASaRDFWTLRYTTSLEDGCLVICERSLTSTTGGPTgpsATCFVRGEMLPSGYLIRPCDGGGCIIHIVDHVDLDIWSVPEVIRPLYESSKILAQ 364
                 ****************************************98866779*************************************************** PP

                 HHHHHHTXXXXX CS
       START 194 ktwvatlqrqce 205
                 k+++a+l++ ++
  KZV14686.1 365 KMTMAALRHVRQ 376
                 *******98765 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.10.10.602.9E-19479IPR009057Homeodomain-like
PROSITE profilePS5007115.6131680IPR001356Homeobox domain
SMARTSM003891.1E-151884IPR001356Homeobox domain
CDDcd000861.14E-162181No hitNo description
PfamPF000463.2E-162179IPR001356Homeobox domain
SuperFamilySSF466893.42E-162182IPR009057Homeodomain-like
CDDcd146863.79E-673112No hitNo description
PROSITE profilePS5084824.799158386IPR002913START domain
CDDcd088753.25E-68162378No hitNo description
Gene3DG3DSA:3.30.530.204.0E-22166372IPR023393START-like domain
SMARTSM002349.0E-47167377IPR002913START domain
PfamPF018527.4E-50168376IPR002913START domain
SuperFamilySSF559611.51E-36168379No hitNo description
PfamPF086707.6E-47699842IPR013978MEKHLA
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0009855Biological Processdetermination of bilateral symmetry
GO:0009944Biological Processpolarity specification of adaxial/abaxial axis
GO:0010072Biological Processprimary shoot apical meristem specification
GO:0080060Biological Processintegument development
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0008289Molecular Functionlipid binding
Sequence ? help Back to Top
Protein Sequence    Length: 843 aa     Download sequence    Send to blast
MYRESNGSSS NSKQQQMDAS KYVRYTPEQV EALERVYAEC PKPSSLRRQQ LIRECPILSN  60
IEPKQIKVWF QNRRCREKQR KESSRLQSVN RKLSAMNKLL MEENDRLQKQ VSQLVYDNGF  120
MRQQIHTVST TTDTSCESVV LNGQQQQQNP ASQHQHRDAN TPAGLLAIAE ETLTEFLGKA  180
TGTAVDWVQM IGMKPGPDSI GIVAVSRNCS GVAARACGLV SLEATKVAEL LKDRPSWYRD  240
CRCIDIASVI PTGNGGTIEL VYMQTYAPTT LASARDFWTL RYTTSLEDGC LVICERSLTS  300
TTGGPTGPSA TCFVRGEMLP SGYLIRPCDG GGCIIHIVDH VDLDIWSVPE VIRPLYESSK  360
ILAQKMTMAA LRHVRQIAQE TNGEIQCNGG RQPAVLRALS QKLCRGFNDA VNGFADDGWS  420
IMASDGVEDV TIAINSSPSK FLGSQYNTLS TLPSFGGVLC ARASMLLQSV APALLVRFLR  480
EHRSEWADHG VDVYSAASLK ANPYAVPCAR PGGFPSSQVI LPLAQTVEHE EFLEVVRLEG  540
HAFSPEDIAL SRDMYLLQLC NGIDETTSGA CAQLVFAPID ESFGDDAPLL PSGFRVIPLD  600
PKSDARGTTR TLDLASALGG ARCAGEGDLS SQNLRSVLTI AFQFTFESHY QDSVAAMARQ  660
YVRSIVGSVQ RVAMAIAPSR LSSHLVPKPL PGSPEAVILA RWIFRGYCMH TGTELFQPES  720
NSGDAVLKQL WHHTDAIMCC SIKTNASAVF TFANQAGLDM LETTLVALQD IMLDKILDEA  780
GRKVLLAEFS KIMQQGFAYL PAGVCVSSMG RPVSYEHAIA WKVLNDEDSN HCLAFMFVNW  840
SFV
Functional Description ? help Back to Top
Source Description
UniProtProbable transcription factor involved in the determination of adaxial-abaxial polarity in ovule primordium. Specifies adaxial leaf fates. {ECO:0000269|PubMed:11395776, ECO:0000269|PubMed:15328016, ECO:0000269|PubMed:15598805}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapKZV14686.1
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: Repressed by miR165 and miR166. {ECO:0000269|PubMed:14999284, ECO:0000269|PubMed:16033795, ECO:0000269|PubMed:17237362}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009777911.10.0PREDICTED: homeobox-leucine zipper protein ATHB-14-like isoform X1
RefseqXP_016503307.10.0PREDICTED: homeobox-leucine zipper protein ATHB-14-like isoform X1
SwissprotO042910.0ATB14_ARATH; Homeobox-leucine zipper protein ATHB-14
TrEMBLA0A2Z6ZZM70.0A0A2Z6ZZM7_9LAMI; Homeobox-leucine zipper protein ATHB-14-like
STRINGXP_009777911.10.0(Nicotiana sylvestris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA45724140
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G34710.10.0HD-ZIP family protein
Publications ? help Back to Top
  1. Ding Y, et al.
    Four distinct types of dehydration stress memory genes in Arabidopsis thaliana.
    BMC Plant Biol., 2013. 13: p. 229
    [PMID:24377444]
  2. Jia X, et al.
    Functional plasticity of miR165/166 in plant development revealed by small tandem target mimic.
    Plant Sci., 2015. 233: p. 11-21
    [PMID:25711809]
  3. Müller CJ, et al.
    PHABULOSA Mediates an Auxin Signaling Loop to Regulate Vascular Patterning in Arabidopsis.
    Plant Physiol., 2016. 170(2): p. 956-70
    [PMID:26637548]
  4. Yamada T,Sasaki Y,Hashimoto K,Nakajima K,Gasser CS
    CORONA, PHABULOSA and PHAVOLUTA collaborate with BELL1 to confine WUSCHEL expression to the nucellus in Arabidopsis ovules.
    Development, 2016. 143(3): p. 422-6
    [PMID:26700684]
  5. Kim ES, et al.
    HAWAIIAN SKIRT regulates the quiescent center-independent meristem activity in Arabidopsis roots.
    Physiol Plant, 2016. 157(2): p. 221-33
    [PMID:26968317]
  6. Husbands AY,Aggarwal V,Ha T,Timmermans MC
    In Planta Single-Molecule Pull-Down Reveals Tetrameric Stoichiometry of HD-ZIPIII:LITTLE ZIPPER Complexes.
    Plant Cell, 2016. 28(8): p. 1783-94
    [PMID:27385814]
  7. Di Ruocco G, et al.
    Differential spatial distribution of miR165/6 determines variability in plant root anatomy.
    Development, 2018.
    [PMID:29158439]
  8. Wójcik AM,Nodine MD,Gaj MD
    miR160 and miR166/165 Contribute to the LEC2-Mediated Auxin Response Involved in the Somatic Embryogenesis Induction in Arabidopsis.
    Front Plant Sci, 2017. 8: p. 2024
    [PMID:29321785]
  9. Hashimoto K,Miyashima S,Sato-Nara K,Yamada T,Nakajima K
    Functionally Diversified Members of the MIR165/6 Gene Family Regulate Ovule Morphogenesis in Arabidopsis thaliana.
    Plant Cell Physiol., 2018. 59(5): p. 1017-1026
    [PMID:29462472]