PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | KZV14591.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Gesneriaceae; Didymocarpoideae; Trichosporeae; Loxocarpinae; Dorcoceras
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Family | HD-ZIP | ||||||||
Protein Properties | Length: 216aa MW: 24444.6 Da PI: 10.3332 | ||||||||
Description | HD-ZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 59.5 | 5.3e-19 | 95 | 148 | 2 | 55 |
T--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHH CS Homeobox 2 rkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRake 55 rk+ +++k+q + Le+ F+++++++ ++++eLA+kl+L+ rqV vWFqNrRa++ KZV14591.1 95 RKKLRLSKDQSTLLEDSFRQHSTLTMAQKQELAEKLNLKPRQVEVWFQNRRARK 148 677889**********************************************95 PP | |||||||
2 | HD-ZIP_I/II | 76.9 | 3.4e-25 | 95 | 149 | 1 | 55 |
HD-ZIP_I/II 1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtk 55 +kk+rlsk+q++lLE+sF+++++L+ +K+ela++L+l+prqv+vWFqnrRAR KZV14591.1 95 RKKLRLSKDQSTLLEDSFRQHSTLTMAQKQELAEKLNLKPRQVEVWFQNRRARKN 149 69***************************************************75 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF46689 | 2.61E-17 | 87 | 147 | IPR009057 | Homeodomain-like |
PROSITE profile | PS50071 | 16.536 | 91 | 151 | IPR001356 | Homeobox domain |
SMART | SM00389 | 8.6E-16 | 93 | 155 | IPR001356 | Homeobox domain |
Pfam | PF00046 | 3.4E-16 | 95 | 148 | IPR001356 | Homeobox domain |
Gene3D | G3DSA:1.10.10.60 | 6.2E-18 | 95 | 147 | IPR009057 | Homeodomain-like |
CDD | cd00086 | 5.14E-16 | 95 | 147 | No hit | No description |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 216 aa Download sequence Send to blast |
MEETDVSSNM KLGLDLRLGL SKYEPKTDNS KKNKRVFFLD LSIPHHPSDL DHHARYSSSS 60 CVDIMQETMK QTRKKGIFSG GCKEDDDMNY SNCCRKKLRL SKDQSTLLED SFRQHSTLTM 120 AQKQELAEKL NLKPRQVEVW FQNRRARKNI SASAAHIGSN DSSGVSPAVV QSNSKRVGHL 180 QNVLFVRENL KSGGCRGRHH RGVQTKQAHH LNGLNS |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | KZV14591.1 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_022871793.1 | 7e-39 | homeobox-leucine zipper protein HAT9-like | ||||
TrEMBL | A0A2Z6ZZV7 | 1e-160 | A0A2Z6ZZV7_9LAMI; Uncharacterized protein | ||||
STRING | Migut.K00228.1.p | 5e-37 | (Erythranthe guttata) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA290 | 24 | 186 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G17460.1 | 1e-23 | Homeobox-leucine zipper protein 4 (HB-4) / HD-ZIP protein |