PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | KZV14284.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Gesneriaceae; Didymocarpoideae; Trichosporeae; Loxocarpinae; Dorcoceras
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Family | HD-ZIP | ||||||||
Protein Properties | Length: 218aa MW: 24940.2 Da PI: 6.5303 | ||||||||
Description | HD-ZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 60.8 | 2.1e-19 | 61 | 113 | 4 | 56 |
-SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 4 RttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 + +++++ql+ Le+ F+++ +++ +++ +LAk lgL+ rq+ vWFqNrRa++k KZV14284.1 61 KKRLSTDQLDLLENSFQEEIKLDPDRKMKLAKDLGLQPRQIAVWFQNRRARWK 113 55699***********************************************9 PP | |||||||
2 | HD-ZIP_I/II | 120.2 | 1.1e-38 | 60 | 151 | 2 | 93 |
HD-ZIP_I/II 2 kkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreelke 93 kk+rls++q+ lLE+sF+ee kL+p+rK++la++Lglqprq+avWFqnrRAR+k+kqlE y++Lk+++d++++e+++L++ev +Lr++lk+ KZV14284.1 60 KKKRLSTDQLDLLENSFQEEIKLDPDRKMKLAKDLGLQPRQIAVWFQNRRARWKAKQLELLYDSLKQEFDNVSREKHNLQQEVFSLRATLKD 151 9**************************************************************************************99986 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF46689 | 5.99E-19 | 46 | 117 | IPR009057 | Homeodomain-like |
PROSITE profile | PS50071 | 16.568 | 55 | 115 | IPR001356 | Homeobox domain |
SMART | SM00389 | 6.9E-18 | 58 | 119 | IPR001356 | Homeobox domain |
CDD | cd00086 | 5.35E-17 | 60 | 116 | No hit | No description |
Pfam | PF00046 | 1.7E-16 | 61 | 113 | IPR001356 | Homeobox domain |
Gene3D | G3DSA:1.10.10.60 | 2.6E-20 | 62 | 122 | IPR009057 | Homeodomain-like |
PRINTS | PR00031 | 1.2E-5 | 86 | 95 | IPR000047 | Helix-turn-helix motif |
PROSITE pattern | PS00027 | 0 | 90 | 113 | IPR017970 | Homeobox, conserved site |
PRINTS | PR00031 | 1.2E-5 | 95 | 111 | IPR000047 | Helix-turn-helix motif |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 218 aa Download sequence Send to blast |
MDWKGNFRVP FVPRVPDPSP FSFLYSYNYD HYPAGLEMKQ QSVPGLMDNK SCNVIGQDPK 60 KKRLSTDQLD LLENSFQEEI KLDPDRKMKL AKDLGLQPRQ IAVWFQNRRA RWKAKQLELL 120 YDSLKQEFDN VSREKHNLQQ EVFSLRATLK DQAAKKQVSK AYTEVSGEET VESTSLPSCD 180 KSGGNGNQIP ECSYALNVDD FNPVMMGAAY WADMPSCS |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 107 | 115 | RRARWKAKQ |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Putative transcription factor. {ECO:0000250}. |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | KZV14284.1 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_011094442.1 | 7e-97 | putative homeobox-leucine zipper protein ATHB-51 | ||||
Swissprot | Q9LZR0 | 3e-51 | ATB51_ARATH; Putative homeobox-leucine zipper protein ATHB-51 | ||||
TrEMBL | A0A2Z6ZYE9 | 1e-162 | A0A2Z6ZYE9_9LAMI; Homeobox-leucine zipper protein ATHB-51 | ||||
STRING | Migut.J00491.1.p | 2e-94 | (Erythranthe guttata) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA3869 | 22 | 46 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G03790.1 | 7e-44 | homeobox 51 |
Publications ? help Back to Top | |||
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