PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Dca62148.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Caryophyllaceae; Caryophylleae; Dianthus
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Family | ERF | ||||||||
Protein Properties | Length: 184aa MW: 19523 Da PI: 4.3577 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 49.8 | 8.5e-16 | 13 | 62 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 + y+G+r + g+Wv+eIr+p++ ++r++lg+f t+e+Aa+a++ a+++l+g Dca62148.1 13 PVYRGIR--TRGGKWVSEIREPRK---TTRIWLGTFSTPEMAAAAYDVAALALKG 62 68****6..568*********843...5***********************9986 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Pfam | PF00847 | 1.9E-9 | 13 | 62 | IPR001471 | AP2/ERF domain |
PROSITE profile | PS51032 | 19.836 | 14 | 70 | IPR001471 | AP2/ERF domain |
Gene3D | G3DSA:3.30.730.10 | 6.0E-27 | 14 | 71 | IPR001471 | AP2/ERF domain |
SMART | SM00380 | 1.3E-28 | 14 | 76 | IPR001471 | AP2/ERF domain |
SuperFamily | SSF54171 | 3.14E-18 | 14 | 71 | IPR016177 | DNA-binding domain |
CDD | cd00018 | 1.07E-16 | 15 | 72 | No hit | No description |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0050832 | Biological Process | defense response to fungus | ||||
GO:0003677 | Molecular Function | DNA binding | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 184 aa Download sequence Send to blast |
MLGPTPYLTG KNPVYRGIRT RGGKWVSEIR EPRKTTRIWL GTFSTPEMAA AAYDVAALAL 60 KGVEAVLNFP EDVIRYPVPG SALPADIRRA AAAAAAMREA KEKAAVVVEE AVVEKGGGID 120 GGGGSESKEE YVDIEALFDM PNLLVDMAGG MMVSPPRMTS TVDDHDFDDD DDGGGGGISS 180 LWSY |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Probably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). {ECO:0000250}. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_021844449.1 | 1e-62 | ethylene-responsive transcription factor ERF027-like | ||||
Swissprot | Q9SJR0 | 6e-42 | ERF24_ARATH; Ethylene-responsive transcription factor ERF024 | ||||
TrEMBL | A0A0K9R4J6 | 9e-60 | A0A0K9R4J6_SPIOL; Uncharacterized protein | ||||
STRING | XP_010278525.1 | 1e-58 | (Nelumbo nucifera) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G52020.1 | 1e-30 | ERF family protein |