PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Dca4734.1
Organism
Dianthus caryophyllus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Caryophyllaceae; Caryophylleae; Dianthus
Family ERF
Protein Properties Length: 339aa    MW: 37180.1 Da    PI: 4.2737
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Dca4734.1genomeDCAView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP253.18.1e-17117163252
        AP2   2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkk 52 
                +y+GVr++k +g+W+AeIr+p    +r  r++lg+f taeeA  a++  + +
  Dca4734.1 117 KYRGVRQRK-WGKWAAEIRHP----IRgVRIWLGTFNTAEEASDAYELKKME 163
                8*******9.**********7....246******************987765 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF008471.0E-10117164IPR001471AP2/ERF domain
SMARTSM003806.2E-19117177IPR001471AP2/ERF domain
CDDcd000182.26E-22117157No hitNo description
Gene3DG3DSA:3.30.730.109.9E-22117162IPR001471AP2/ERF domain
PROSITE profilePS5103219.902117177IPR001471AP2/ERF domain
SuperFamilySSF541716.54E-16117164IPR016177DNA-binding domain
PRINTSPR003673.8E-10118129IPR001471AP2/ERF domain
PRINTSPR003673.8E-10140156IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 339 aa     Download sequence    Send to blast
MFLKSESSML THNSFYEKTK PVASKTLRKV RVICYDPDLT DSSSDDEMTY PRIERPKKRV  60
IQEINLPLTS TVALNNNHAN VVAETESSCQ DSNNGGKNGE KKRRVLTNAL RKPDGVKYRG  120
VRQRKWGKWA AEIRHPIRGV RIWLGTFNTA EEASDAYELK KMEFDALIAA DKSQNASCSA  180
LQSQNPAASD DSEGVLSHNS PASVLENDAT ASNTQNNTGD EISNALTVTE GDSLFVAVDV  240
KDTEAPVLSS IAEEFQCEDG QGLDLEMEFG SSLLLNDFGD LFSDFPAIDD LLVGGDFDGL  300
NPTDLPDFDF ELGNEELAWI EEPLNFGQHA AAAAALNFC
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00217DAPTransfer from AT1G68550Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010681556.11e-121PREDICTED: ethylene-responsive transcription factor ERF118
RefseqXP_010681557.11e-121PREDICTED: ethylene-responsive transcription factor ERF118
TrEMBLA0A0K9QMF16e-85A0A0K9QMF1_SPIOL; Uncharacterized protein
STRINGXP_010681556.11e-120(Beta vulgaris)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G68550.25e-31ERF family protein