PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Dca44975.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Caryophyllaceae; Caryophylleae; Dianthus
Family Dof
Protein Properties Length: 280aa    MW: 31108.1 Da    PI: 4.4523
Description Dof family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Dca44975.1genomeDCAView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-Dof114.54.6e-363088462
      zf-Dof  4 kalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkkss 62
                 a +cprC s+ntkfCyynnyslsqPr+fCk+CrryWt+GG+lr vPvGgg+rk+++s+
  Dca44975.1 30 PAPNCPRCASSNTKFCYYNNYSLSQPRFFCKGCRRYWTRGGSLRSVPVGGGCRKSRRSR 88
                5679***************************************************9976 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
ProDomPD0074782.0E-231676IPR003851Zinc finger, Dof-type
PfamPF027013.5E-313286IPR003851Zinc finger, Dof-type
PROSITE profilePS5088427.8663286IPR003851Zinc finger, Dof-type
PROSITE patternPS0136103470IPR003851Zinc finger, Dof-type
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 280 aa     Download sequence    Send to blast
MMETSSDQLF QCPPVPSLMM DRRWRANVDP APNCPRCASS NTKFCYYNNY SLSQPRFFCK  60
GCRRYWTRGG SLRSVPVGGG CRKSRRSRSA KSSSSGSSVV GTSPVTSSDC GRESAGADID  120
MAAVFAKYLN HDQRVFGQEI NEATNNTTST TSSDASHDSL TSSSCGLENV FESHMFADDY  180
LDPESQLIKP LAPDQAQFQE KEAAQGYINP ELASFNDIIE DVFWSEDSNM SNLTWQPIAQ  240
SQEFNSALLP VDQYDVSTDL VSTDNWNYFD NSGFEVFSRT
Functional Description ? help Back to Top
Source Description
UniProtTranscription factor that binds specifically to a 5'-AA[AG]G-3' consensus core sequence. {ECO:0000250}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_021760968.11e-108dof zinc finger protein DOF1.2-like
SwissprotP683495e-42DOF12_ARATH; Dof zinc finger protein DOF1.2
TrEMBLA0A0K9RZP92e-96A0A0K9RZP9_SPIOL; Uncharacterized protein
STRINGXP_010680114.15e-97(Beta vulgaris)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G21340.12e-32Dof family protein