PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Dca44085.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Caryophyllaceae; Caryophylleae; Dianthus
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Family | bZIP | ||||||||
Protein Properties | Length: 226aa MW: 25706.2 Da PI: 7.6677 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 32.5 | 1.9e-10 | 134 | 184 | 5 | 58 |
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevak 58 ++ +rk +NRe+ArrsR RK++ e+L++++ Le eN++ ++l+ +v++ Dca44085.1 134 RKRKRKLSNRESARRSRMRKQQHFENLRNEANRLELENQQAT---NRLRLMVQN 184 6789**********************************8666...555555554 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM00338 | 2.2E-10 | 130 | 194 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 10.703 | 132 | 195 | IPR004827 | Basic-leucine zipper domain |
Gene3D | G3DSA:1.20.5.170 | 3.0E-8 | 134 | 186 | No hit | No description |
Pfam | PF00170 | 1.7E-7 | 134 | 186 | IPR004827 | Basic-leucine zipper domain |
SuperFamily | SSF57959 | 2.57E-9 | 134 | 188 | No hit | No description |
CDD | cd14702 | 6.58E-19 | 135 | 183 | No hit | No description |
PROSITE pattern | PS00036 | 0 | 137 | 152 | IPR004827 | Basic-leucine zipper domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding | ||||
GO:0044212 | Molecular Function | transcription regulatory region DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 226 aa Download sequence Send to blast |
MLSTISPIYQ AEPVLGCGKG FGYGSSLYSS SQGGFTPWEN LESFFVSQDE KFDHGSVSVS 60 KSKPEPSLNQ GNAGMGLGLD DIDQKPFCHD ETGFNHESPN QTSVLSSSSG SDDPNQNPNG 120 SGHWYGDPNQ NNERKRKRKL SNRESARRSR MRKQQHFENL RNEANRLELE NQQATNRLRL 180 MVQNVQFITS ENDKLKGEYV ILQRRLMELN QIWQIQQIHR NNTNQS |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 132 | 139 | ERKRKRKL |
2 | 133 | 138 | RKRKRK |
3 | 146 | 153 | RRSRMRKQ |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G22850.2 | 7e-25 | basic leucine-zipper 6 |