PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Dca36799.1
Organism
Dianthus caryophyllus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Caryophyllaceae; Caryophylleae; Dianthus
Family BES1
Protein Properties Length: 316aa    MW: 34061 Da    PI: 8.5711
Description BES1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Dca36799.1genomeDCAView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF822224.42.3e-6931431145
      DUF822   1 ggsgrkptwkErEnnkrRERrRRaiaakiyaGLRaqGnyklpkraDnneVlkALcreAGwvvedDGttyrkgskpleeaeaagssasaspesslqsslk 99 
                 g++gr ptwkErEnnk+RERrRRaiaaki++GLR+qGnyklpk++DnneVlkALc eAGw+vedDGttyr+g+kp+  +e++g+sa++s +ss+q s++
  Dca36799.1   3 GSTGRLPTWKERENNKKRERRRRAIAAKIFTGLRSQGNYKLPKHCDNNEVLKALCLEAGWIVEDDGTTYRQGCKPT-PMEIGGTSANISGCSSIQPSPQ 100
                 5899************************************************************************.********************** PP

      DUF822 100 ssalaspvesysaspksssfpspssldsislasaasllpvlsvlsl 145
                 ssa +sp++sy+asp+sss+psps++ds++++    llp+l++l+ 
  Dca36799.1 101 SSAYPSPIPSYHASPTSSSYPSPSRYDSNPSS---YLLPFLQNLAP 143
                 *****************************985...89999998764 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF056872.3E-635128IPR008540BES1/BZR1 plant transcription factor, N-terminal
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0009741Biological Processresponse to brassinosteroid
GO:0005634Cellular Componentnucleus
GO:0005737Cellular Componentcytoplasm
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 316 aa     Download sequence    Send to blast
MAGSTGRLPT WKERENNKKR ERRRRAIAAK IFTGLRSQGN YKLPKHCDNN EVLKALCLEA  60
GWIVEDDGTT YRQGCKPTPM EIGGTSANIS GCSSIQPSPQ SSAYPSPIPS YHASPTSSSY  120
PSPSRYDSNP SSYLLPFLQN LAPLRISNSA PVTPPLSSPT SRGSKRKSDW DPLLNSTISG  180
THQSVRHYPI FALSAPSSPS RRTHHVATPT IPECDESDAS TVDSGRWVSF QTGAPLGAPL  240
SPTYNLVKQA VAQGNMMQES FNGMSLGWGG AVERGRGPEF EFESGAAAVN AWEGERIHEV  300
GAEDLELTLG GAKARC
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5zd4_A2e-29787372452Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
5zd4_B2e-29787372452Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
5zd4_C2e-29787372452Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
5zd4_D2e-29787372452Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_021835401.11e-149BES1/BZR1 homolog protein 2
SwissprotQ94A431e-109BEH2_ARATH; BES1/BZR1 homolog protein 2
TrEMBLA0A0K9R4T91e-146A0A0K9R4T9_SPIOL; Uncharacterized protein
STRINGXP_010680895.11e-146(Beta vulgaris)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G75080.25e-85BES1 family protein