PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Dca36695.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Caryophyllaceae; Caryophylleae; Dianthus
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Family | WRKY | ||||||||
Protein Properties | Length: 258aa MW: 28181.4 Da PI: 10.4676 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 32.8 | 1.4e-10 | 221 | 240 | 3 | 22 |
-SS-EEEEEEE--TT-SS-E CS WRKY 3 DgynWrKYGqKevkgsefpr 22 D y+WrKYGqK++kgs++pr Dca36695.1 221 DDYSWRKYGQKPIKGSPYPR 240 99*****************9 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Pfam | PF10533 | 2.2E-15 | 174 | 217 | IPR018872 | Zn-cluster domain |
Gene3D | G3DSA:2.20.25.80 | 2.8E-10 | 207 | 240 | IPR003657 | WRKY domain |
SuperFamily | SSF118290 | 1.44E-8 | 213 | 241 | IPR003657 | WRKY domain |
PROSITE profile | PS50811 | 12.335 | 214 | 240 | IPR003657 | WRKY domain |
SMART | SM00774 | 6.2E-4 | 219 | 254 | IPR003657 | WRKY domain |
Pfam | PF03106 | 7.1E-7 | 221 | 242 | IPR003657 | WRKY domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 258 aa Download sequence Send to blast |
MAVELMHGSH AGTTSVMEEY AIREAAAAGI QSVEKLIKLL SRCQDVNLKP NTMSSSSWND 60 VEYKDVADVV VSKFRKVISL LDRTRTGQAR FRRGPKQVLL TGSHGSAFTR VQVQCPPPKT 120 INFSTSAGNS VTTSYMSSLT GDIESVQPSV SSSGFQITNM SSLGKPPLSG NSLKRKCSSK 180 DVSNCGASSG RCHCSKQRKS RMKRVVRVPA ISVKTADIPP DDYSWRKYGQ KPIKGSPYPR 240 FVMPLCYISF NASLFTLL |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Transcription factor. Interacts specifically with the W box (5'-(T)TGAC[CT]-3'), a frequently occurring elicitor-responsive cis-acting element (By similarity). {ECO:0000250}. |
Regulation -- Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | INDUCTION: By salicylic acid and strongly during leaf senescence. {ECO:0000269|PubMed:11449049, ECO:0000269|PubMed:11722756}. |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_021759456.1 | 8e-87 | probable WRKY transcription factor 7, partial | ||||
Refseq | XP_021851375.1 | 5e-87 | probable WRKY transcription factor 7 | ||||
Swissprot | Q9STX0 | 2e-55 | WRKY7_ARATH; Probable WRKY transcription factor 7 | ||||
TrEMBL | A0A0K9QJ79 | 9e-86 | A0A0K9QJ79_SPIOL; Uncharacterized protein | ||||
STRING | VIT_18s0001g10030.t01 | 8e-79 | (Vitis vinifera) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G24240.1 | 7e-58 | WRKY DNA-binding protein 7 |