PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Dca33335.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Caryophyllaceae; Caryophylleae; Dianthus
Family Dof
Protein Properties Length: 319aa    MW: 35667 Da    PI: 7.3253
Description Dof family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Dca33335.1genomeDCAView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-Dof110.96e-3555112259
      zf-Dof   2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknk 59 
                 ++++lkcprC+stntkfCyynny+ sqPr+fCkaC+r+WtkGG+lrnvP Gggr++++
  Dca33335.1  55 QHEQLKCPRCESTNTKFCYYNNYNKSQPRHFCKACKRHWTKGGTLRNVPEGGGRKNKR 112
                 57899**********************************************9976654 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF027015.6E-3157111IPR003851Zinc finger, Dof-type
ProDomPD0074783.0E-2259112IPR003851Zinc finger, Dof-type
PROSITE profilePS5088426.8559113IPR003851Zinc finger, Dof-type
PROSITE patternPS0136106197IPR003851Zinc finger, Dof-type
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 319 aa     Download sequence    Send to blast
MGLSSKQVSS DGSDWNQALL EGAKTLEYPK MSSINRQHDQ QQQQQQQHQN QHQNQHEQLK  60
CPRCESTNTK FCYYNNYNKS QPRHFCKACK RHWTKGGTLR NVPEGGGRKN KRLKLSKAAT  120
STITTTTTTT ASTQLGGGIP TFKNNNINNN SKASFYENFV KQQQQQHQET SSITFNHNNK  180
GLLLNDGIFL PSTTTTMTSN LSSLCYDHQE IQGLPYTNIG GCLFESDNNI DDPCSVSSTI  240
TPILYNFTGG GGGDLANNNS SLNTNNDHHY QHSATTTTTT RTNDVMMGMS SNWGWDEFDK  300
FVSVEADLTI PWDDSDIKP
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010686557.12e-74PREDICTED: dof zinc finger protein DOF1.4
TrEMBLA0A0K9R3V07e-67A0A0K9R3V0_SPIOL; Uncharacterized protein
STRINGXP_010686557.19e-74(Beta vulgaris)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G28310.24e-28Dof family protein