PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Dca29572.1
Organism
Dianthus caryophyllus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Caryophyllaceae; Caryophylleae; Dianthus
Family bZIP
Protein Properties Length: 254aa    MW: 27640.1 Da    PI: 10.0353
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Dca29572.1genomeDCAView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_131.83.2e-10124159540
                 CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
      bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLea 40 
                 kr rr   NR +A+rsR RK+++i eLe+ v +L+a
  Dca29572.1 124 KRVRRVLANRQSAQRSRVRKLQYISELERGVTSLQA 159
                 899***************************999975 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS502178.554122159IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1701.5E-10124158No hitNo description
SuperFamilySSF579591.46E-8124160No hitNo description
PfamPF001702.3E-8124158IPR004827Basic-leucine zipper domain
CDDcd147033.06E-19125159No hitNo description
PROSITE patternPS000360127142IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 254 aa     Download sequence    Send to blast
MAPLPPKIPH QIWPPSTASP PPMWSDDYLS ARRGTHRRSM SDSIADIGGA GFNRLDDQQL  60
FSMLTDGMIS VSAAVGPASS PASDQNSNND DNNNNNNNGN GDSPMQINPT LDHSHSDPTD  120
FDPKRVRRVL ANRQSAQRSR VRKLQYISEL ERGVTSLQAP YPHYPESRLA CKAGGVSIDV  180
PATTDRPGLY LPLPHAVSLV CVPPHPPSPP ILKSRAPPPF GSRGCRRRSR FGFGLRFWAS  240
GGVPLPVAPF PHLH
Functional Description ? help Back to Top
Source Description
UniProtTranscriptional activator. {ECO:0000269|PubMed:17719007}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_022028109.18e-37basic leucine zipper 34-like
SwissprotQ9M2K49e-27BZP61_ARATH; Basic leucine zipper 61
TrEMBLA0A251V6Z92e-35A0A251V6Z9_HELAN; Putative basic-leucine zipper domain-containing protein
STRINGEOY131622e-30(Theobroma cacao)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G42380.21e-16bZIP family protein
Publications ? help Back to Top
  1. Ding Y, et al.
    Four distinct types of dehydration stress memory genes in Arabidopsis thaliana.
    BMC Plant Biol., 2013. 13: p. 229
    [PMID:24377444]
  2. Gibalová A, et al.
    Characterization of pollen-expressed bZIP protein interactions and the role of ATbZIP18 in the male gametophyte.
    Plant Reprod, 2017. 30(1): p. 1-17
    [PMID:27896439]
  3. Ezer D, et al.
    The G-Box Transcriptional Regulatory Code in Arabidopsis.
    Plant Physiol., 2017. 175(2): p. 628-640
    [PMID:28864470]